blib/lib/Bio/MUST/Core.pm
|
100.0
|
n/a
|
n/a
|
100.0
|
n/a
|
1.5
|
100.0
|
blib/lib/Bio/MUST/Core/Ali.pm
|
99.6
|
85.5
|
77.7
|
98.2
|
100.0
|
1.1
|
96.3
|
blib/lib/Bio/MUST/Core/Ali/Stash.pm
|
100.0
|
100.0
|
100.0
|
100.0
|
100.0
|
0.0
|
100.0
|
blib/lib/Bio/MUST/Core/Ali/Temporary.pm
|
93.9
|
50.0
|
n/a
|
90.0
|
33.3
|
0.1
|
86.0
|
blib/lib/Bio/MUST/Core/Constants.pm
|
100.0
|
n/a
|
n/a
|
100.0
|
n/a
|
0.1
|
100.0
|
blib/lib/Bio/MUST/Core/GeneticCode.pm
|
100.0
|
n/a
|
66.6
|
100.0
|
100.0
|
0.1
|
97.0
|
blib/lib/Bio/MUST/Core/GeneticCode/Factory.pm
|
100.0
|
83.3
|
n/a
|
100.0
|
n/a
|
21.8
|
99.0
|
blib/lib/Bio/MUST/Core/IdList.pm
|
100.0
|
95.4
|
75.0
|
100.0
|
100.0
|
0.1
|
97.1
|
blib/lib/Bio/MUST/Core/IdMapper.pm
|
100.0
|
70.0
|
78.5
|
100.0
|
80.0
|
0.1
|
94.5
|
blib/lib/Bio/MUST/Core/PostPred.pm
|
100.0
|
n/a
|
n/a
|
100.0
|
100.0
|
0.1
|
100.0
|
blib/lib/Bio/MUST/Core/PostPred/Composition.pm
|
100.0
|
100.0
|
100.0
|
100.0
|
n/a
|
3.8
|
100.0
|
blib/lib/Bio/MUST/Core/Roles/Aliable.pm
|
100.0
|
n/a
|
n/a
|
100.0
|
n/a
|
0.0
|
100.0
|
blib/lib/Bio/MUST/Core/Roles/Listable.pm
|
84.9
|
60.0
|
71.4
|
95.6
|
100.0
|
0.1
|
85.3
|
blib/lib/Bio/MUST/Core/Roles/Taxable.pm
|
77.7
|
0.0
|
n/a
|
87.5
|
n/a
|
0.0
|
75.6
|
blib/lib/Bio/MUST/Core/Seq.pm
|
93.8
|
93.3
|
80.0
|
89.1
|
88.8
|
28.7
|
91.8
|
blib/lib/Bio/MUST/Core/SeqId.pm
|
99.3
|
97.8
|
37.5
|
100.0
|
87.5
|
4.7
|
96.6
|
blib/lib/Bio/MUST/Core/SeqMask.pm
|
78.9
|
52.6
|
65.6
|
93.4
|
100.0
|
3.8
|
78.3
|
blib/lib/Bio/MUST/Core/SeqMask/Freqs.pm
|
100.0
|
100.0
|
75.0
|
100.0
|
100.0
|
0.1
|
98.7
|
blib/lib/Bio/MUST/Core/SeqMask/Pmsf.pm
|
100.0
|
50.0
|
n/a
|
100.0
|
100.0
|
2.7
|
98.2
|
blib/lib/Bio/MUST/Core/SeqMask/Profiles.pm
|
100.0
|
93.7
|
91.6
|
100.0
|
100.0
|
4.9
|
98.5
|
blib/lib/Bio/MUST/Core/SeqMask/Rates.pm
|
100.0
|
87.5
|
95.0
|
100.0
|
100.0
|
6.1
|
98.0
|
blib/lib/Bio/MUST/Core/Taxonomy.pm
|
16.4
|
0.0
|
0.0
|
44.0
|
100.0
|
1.5
|
17.2
|
blib/lib/Bio/MUST/Core/Taxonomy/Category.pm
|
64.2
|
0.0
|
n/a
|
75.0
|
100.0
|
0.0
|
61.9
|
blib/lib/Bio/MUST/Core/Taxonomy/Classifier.pm
|
36.8
|
0.0
|
0.0
|
53.8
|
100.0
|
0.0
|
39.7
|
blib/lib/Bio/MUST/Core/Taxonomy/ColorScheme.pm
|
43.8
|
0.0
|
0.0
|
61.9
|
50.0
|
0.1
|
42.5
|
blib/lib/Bio/MUST/Core/Taxonomy/Criterion.pm
|
36.3
|
0.0
|
0.0
|
66.6
|
100.0
|
0.0
|
17.1
|
blib/lib/Bio/MUST/Core/Taxonomy/Filter.pm
|
50.0
|
0.0
|
n/a
|
66.6
|
66.6
|
0.1
|
44.6
|
blib/lib/Bio/MUST/Core/Taxonomy/Labeler.pm
|
50.0
|
0.0
|
0.0
|
66.6
|
50.0
|
0.0
|
40.4
|
blib/lib/Bio/MUST/Core/Taxonomy/MooseNCBI.pm
|
66.6
|
n/a
|
n/a
|
75.0
|
0.0
|
0.5
|
64.8
|
blib/lib/Bio/MUST/Core/Tree.pm
|
55.1
|
25.0
|
28.5
|
69.0
|
94.1
|
9.4
|
53.2
|
blib/lib/Bio/MUST/Core/Tree/Forest.pm
|
100.0
|
n/a
|
n/a
|
100.0
|
100.0
|
1.3
|
100.0
|
blib/lib/Bio/MUST/Core/Types.pm
|
100.0
|
n/a
|
n/a
|
100.0
|
n/a
|
2.2
|
100.0
|
blib/lib/Bio/MUST/Core/Utils.pm
|
100.0
|
87.5
|
80.0
|
100.0
|
0.0
|
2.8
|
90.9
|