Coverage Summary

Module Bio-Gonzales
Version 0.083
Database: /root/.cpan/build/Bio-Gonzales-0.083-0/cover_db
Report date: 2021-01-02 23:52:00
Perl version: v5.26.1
OS: linux
Thresholds: < 75% < 90% < 100% = 100%

Restrict to regex:

file stmt bran cond sub pod time total
Total 66.8 42.1 34.7 69.9 45.0 100.0 57.7
blib/lib/Bio/Gonzales.pm 100.0 n/a n/a 100.0 n/a 0.3 100.0
blib/lib/Bio/Gonzales/Align/IO.pm 76.3 58.3 n/a 91.6 50.0 0.0 74.0
blib/lib/Bio/Gonzales/Align/Jalview.pm 100.0 n/a n/a 100.0 0.0 0.0 93.7
blib/lib/Bio/Gonzales/Domain/Group.pm 87.9 70.0 25.0 84.2 14.2 0.0 79.4
blib/lib/Bio/Gonzales/Feat.pm 72.8 40.0 76.9 70.5 50.0 0.6 68.6
blib/lib/Bio/Gonzales/Feat/IO/BED.pm 97.7 87.5 100.0 90.0 0.0 0.5 92.5
blib/lib/Bio/Gonzales/Feat/IO/Base.pm 90.0 90.0 77.7 57.1 0.0 0.0 79.8
blib/lib/Bio/Gonzales/Feat/IO/GFF3.pm 68.7 57.8 24.1 83.3 50.0 0.1 62.7
blib/lib/Bio/Gonzales/Feat/IO/SWISS.pm 93.1 75.5 41.1 100.0 0.0 0.5 82.4
blib/lib/Bio/Gonzales/Matrix/IO.pm 50.9 29.8 26.2 69.2 36.3 1.5 39.1
blib/lib/Bio/Gonzales/Matrix/Util.pm 35.6 16.6 12.5 50.0 0.0 0.3 27.8
blib/lib/Bio/Gonzales/MiniFeat.pm 83.0 73.5 72.2 74.1 0.0 0.1 71.2
blib/lib/Bio/Gonzales/Project.pm 67.1 25.0 21.0 77.7 14.2 3.1 55.3
blib/lib/Bio/Gonzales/Project/Functions.pm 67.1 30.0 23.5 48.0 25.0 44.5 50.3
blib/lib/Bio/Gonzales/Range/Cluster.pm 98.0 93.7 100.0 100.0 100.0 0.4 97.5
blib/lib/Bio/Gonzales/Range/Overlap.pm 95.5 57.1 33.3 100.0 100.0 0.4 87.0
blib/lib/Bio/Gonzales/Range/Util.pm 100.0 93.7 81.8 100.0 0.0 0.3 93.6
blib/lib/Bio/Gonzales/Role/BioPerl/Constructor.pm 100.0 n/a n/a 100.0 n/a 0.0 100.0
blib/lib/Bio/Gonzales/Search/IO/HMMER3.pm 98.2 88.4 90.0 94.1 0.0 1.4 95.1
blib/lib/Bio/Gonzales/Seq.pm 48.3 21.9 25.0 56.4 48.1 0.6 40.2
blib/lib/Bio/Gonzales/Seq/Filter.pm 54.5 20.5 16.6 80.0 75.0 0.0 38.8
blib/lib/Bio/Gonzales/Seq/IO.pm 45.1 16.6 n/a 68.7 83.3 1.1 40.7
blib/lib/Bio/Gonzales/Seq/IO/Fasta.pm 94.8 83.3 n/a 100.0 0.0 0.4 92.4
blib/lib/Bio/Gonzales/Seq/IO/fastq.pm 70.7 50.0 n/a 85.7 100.0 0.3 69.4
blib/lib/Bio/Gonzales/Seq/Util.pm 35.4 14.8 41.6 46.1 16.6 0.5 31.7
blib/lib/Bio/Gonzales/Seq/Validate/fasta.pm 86.2 69.5 77.7 100.0 0.0 0.5 80.6
blib/lib/Bio/Gonzales/SummarizedExperiment.pm 61.8 43.4 41.3 49.4 90.7 0.7 55.9
blib/lib/Bio/Gonzales/Tools/SeqMask.pm 78.7 66.6 66.6 87.5 50.0 0.7 76.9
blib/lib/Bio/Gonzales/Util.pm 42.3 16.6 25.0 60.0 40.0 0.9 35.2
blib/lib/Bio/Gonzales/Util/Cerial.pm 48.9 17.6 0.0 64.7 38.4 5.0 44.8
blib/lib/Bio/Gonzales/Util/Development/File.pm 66.1 0.0 0.0 82.3 100.0 1.9 57.7
blib/lib/Bio/Gonzales/Util/File.pm 70.6 48.8 41.0 63.3 47.0 7.7 59.2
blib/lib/Bio/Gonzales/Util/IO/Compressed.pm 100.0 50.0 50.0 100.0 0.0 4.9 88.0
blib/lib/Bio/Gonzales/Util/Log.pm 79.1 36.6 33.3 50.0 68.4 1.1 62.0
blib/lib/Bio/Gonzales/Util/Math.pm 80.0 25.0 0.0 88.8 50.0 16.0 73.0
blib/lib/Bio/Gonzales/Util/Math/kNN/via/Distances.pm 98.0 100.0 n/a 100.0 0.0 0.4 97.0
blib/lib/Bio/Gonzales/Util/Role/FileIO.pm 100.0 80.0 16.6 100.0 50.0 0.7 89.1
blib/lib/Bio/Gonzales/Util/Text.pm 96.4 50.0 n/a 100.0 50.0 0.3 86.6
blib/lib/Bio/Gonzales/Var/Util.pm 21.8 7.1 0.0 36.3 0.0 0.5 17.6