| line |
!l |
l&&!r |
l&&r |
condition |
|
287
|
2 |
2 |
0 |
exists $args{'population'} and exists $args{'totalNumGenes'} |
|
703
|
14 |
2100 |
2 |
exists $args{'calculateFDR'} and $args{'calculateFDR'} != 0 |
|
745
|
20087 |
0 |
16 |
$databaseId =~ /^$kFakeIdPrefix/o and not $self->__origNameInPopulation($$databaseId2OrigNameRef{$databaseId}) |
|
1083
|
0 |
0 |
0 |
$GO::TermFinder::WARNINGS and not exists $warned{$gene} |
|
1147
|
0 |
3 |
16 |
defined $self->__totalNumAnnotatedGenes and $self->__totalNumAnnotatedGenes == $self->totalNumGenes |
|
|
3 |
16 |
0 |
defined $self->__totalNumAnnotatedGenes and $self->__totalNumAnnotatedGenes == $self->totalNumGenes and $GO::TermFinder::WARNINGS |
|
|
16 |
0 |
0 |
defined $self->__totalNumAnnotatedGenes and $self->__totalNumAnnotatedGenes == $self->totalNumGenes and $GO::TermFinder::WARNINGS and not $self->__isUsingPopulation |
|
1173
|
0 |
53129 |
0 |
defined $databaseId and exists $databaseIds{$databaseId} |
|
1195
|
2118 |
0 |
0 |
%duplicates and $GO::TermFinder::WARNINGS |
|
1258
|
3 |
66050 |
0 |
defined $goidsRef and @{$goidsRef;} |