Branch Coverage

pp-hmmpathq.c

Criterion	Covered	Total	%
branch	0	148	0.0

line	true	false	branch
81	0	0	if (!__privtrans->broadcast.incs) return PDL->make_error(PDL_EUSERERROR, "Error in hmmpathq:" "broadcast.incs NULL");
135	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Float,F,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Float,F,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Float,F,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Float,F,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Float,F,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Float,F,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Float,F,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Float,F,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Float,F,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Float,F,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Float,F,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Float,F,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
136	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
142	0	0	for (t--; t>=0; t--) {
148	0	0	{/* Open T */ PDL_EXPAND2(register PDL_Indx T=0, __T_stop=(__T_size)); for(; T<__T_stop; T+=1) {
152	0	0	}PDL_BROADCASTLOOP_END_hmmpathq_readdata
	0	0	}PDL_BROADCASTLOOP_END_hmmpathq_readdata
155	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Double,D,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Double,D,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Double,D,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Double,D,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Double,D,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Double,D,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Double,D,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Double,D,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Double,D,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Double,D,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Double,D,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_Double,D,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
156	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
162	0	0	for (t--; t>=0; t--) {
168	0	0	{/* Open T */ PDL_EXPAND2(register PDL_Indx T=0, __T_stop=(__T_size)); for(; T<__T_stop; T+=1) {
172	0	0	}PDL_BROADCASTLOOP_END_hmmpathq_readdata
	0	0	}PDL_BROADCASTLOOP_END_hmmpathq_readdata
175	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_LDouble,E,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_LDouble,E,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_LDouble,E,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_LDouble,E,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_LDouble,E,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_LDouble,E,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_LDouble,E,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_LDouble,E,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_LDouble,E,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_LDouble,E,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_LDouble,E,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
	0	0	PDL_DECLARE_PARAMS_hmmpathq_1(PDL_LDouble,E,PDL_Indx,N,PDL_Indx,N,PDL_Indx,N)
176	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
	0	0	PDL_BROADCASTLOOP_START_hmmpathq_readdata {
182	0	0	for (t--; t>=0; t--) {
188	0	0	{/* Open T */ PDL_EXPAND2(register PDL_Indx T=0, __T_stop=(__T_size)); for(; T<__T_stop; T+=1) {
192	0	0	}PDL_BROADCASTLOOP_END_hmmpathq_readdata
	0	0	}PDL_BROADCASTLOOP_END_hmmpathq_readdata
227	0	0	if (!PDL) return (pdl_error){PDL_EFATAL, "PDL core struct is NULL, can't continue",0};
229	0	0	if (!__privtrans) return PDL->make_error_simple(PDL_EFATAL, "Couldn't create trans");
234	0	0	PDL_RETERROR(PDL_err, PDL->type_coerce(__privtrans));
235	0	0	PDL_RETERROR(PDL_err, PDL->make_trans_mutual(__privtrans));