| line |
count |
pod |
subroutine |
|
12
|
7 |
n/a |
BEGIN |
|
13
|
7 |
n/a |
BEGIN |
|
14
|
7 |
n/a |
BEGIN |
|
15
|
7 |
n/a |
BEGIN |
|
16
|
7 |
n/a |
BEGIN |
|
17
|
7 |
n/a |
BEGIN |
|
18
|
7 |
n/a |
BEGIN |
|
20
|
7 |
n/a |
BEGIN |
|
21
|
7 |
n/a |
BEGIN |
|
22
|
7 |
n/a |
BEGIN |
|
24
|
7 |
n/a |
BEGIN |
|
29
|
37 |
No |
new |
|
74
|
40 |
Yes |
id |
|
89
|
0 |
Yes |
name |
|
104
|
29 |
Yes |
imports |
|
124
|
62 |
Yes |
treat_xrefs_as_equivalent |
|
144
|
62 |
Yes |
treat_xrefs_as_is_a |
|
164
|
32 |
Yes |
date |
|
180
|
48 |
Yes |
default_relationship_id_prefix |
|
195
|
58 |
Yes |
default_namespace |
|
210
|
86 |
Yes |
idspaces |
|
229
|
21 |
Yes |
data_version |
|
244
|
35 |
Yes |
saved_by |
|
259
|
57 |
Yes |
remarks |
|
278
|
154 |
Yes |
subset_def_map |
|
293
|
61 |
Yes |
synonym_type_def_set |
|
313
|
2294 |
Yes |
add_term |
|
338
|
18 |
Yes |
add_instance |
|
363
|
1 |
Yes |
add_term_as_string |
|
392
|
1 |
Yes |
add_instance_as_string |
|
421
|
142 |
Yes |
add_relationship_type |
|
443
|
27 |
Yes |
add_relationship_type_as_string |
|
476
|
5 |
Yes |
delete_term |
|
506
|
2 |
Yes |
delete_instance |
|
531
|
56 |
Yes |
delete_relationship |
|
561
|
6822 |
Yes |
has_term |
|
576
|
21 |
Yes |
has_instance |
|
592
|
251 |
Yes |
has_term_id |
|
608
|
9 |
Yes |
has_instance_id |
|
624
|
276 |
Yes |
has_relationship_type |
|
638
|
3673 |
Yes |
has_relationship_type_id |
|
652
|
1441 |
Yes |
has_relationship_id |
|
666
|
0 |
Yes |
equals |
|
685
|
94 |
Yes |
get_terms |
|
688
|
30 |
n/a |
__ANON__ |
|
696
|
5785 |
n/a |
__ANON__ |
|
711
|
46 |
Yes |
get_instances |
|
721
|
114 |
n/a |
__ANON__ |
|
736
|
19 |
Yes |
get_terms_sorted_by_id |
|
737
|
3997 |
n/a |
__ANON__ |
|
751
|
15 |
Yes |
get_instances_sorted_by_id |
|
752
|
16 |
n/a |
__ANON__ |
|
766
|
2 |
Yes |
get_terms_by_subnamespace |
|
789
|
2 |
Yes |
get_instances_by_subnamespace |
|
812
|
2 |
Yes |
get_terms_by_subset |
|
814
|
6 |
n/a |
__ANON__ |
|
832
|
2 |
Yes |
get_instances_by_subset |
|
852
|
10 |
Yes |
get_relationships |
|
867
|
27 |
Yes |
get_relationship_types |
|
882
|
4005 |
Yes |
get_relationship_types_sorted_by_id |
|
883
|
92863 |
n/a |
__ANON__ |
|
898
|
1 |
Yes |
get_term_local_neighbourhood |
|
912
|
9 |
Yes |
get_relationships_by_source_term |
|
944
|
99 |
Yes |
get_relationships_by_target_term |
|
977
|
17750 |
Yes |
get_term_by_id |
|
991
|
29 |
Yes |
get_instance_by_id |
|
1005
|
3 |
Yes |
set_term_id |
|
1056
|
2 |
Yes |
set_instance_id |
|
1085
|
4663 |
Yes |
get_relationship_type_by_id |
|
1100
|
12 |
Yes |
get_term_by_name |
|
1121
|
4 |
Yes |
get_instance_by_name |
|
1143
|
8 |
Yes |
get_term_by_name_or_synonym |
|
1177
|
8 |
Yes |
get_instance_by_name_or_synonym |
|
1209
|
16 |
Yes |
get_terms_by_name |
|
1236
|
5 |
Yes |
get_instances_by_name |
|
1263
|
8 |
Yes |
get_relationship_types_by_name |
|
1290
|
12 |
Yes |
get_relationship_type_by_name |
|
1312
|
3451 |
Yes |
add_relationship |
|
1373
|
217 |
Yes |
get_relationship_by_id |
|
1387
|
222 |
Yes |
create_rel |
|
1425
|
221 |
Yes |
get_child_terms |
|
1450
|
22912 |
Yes |
get_parent_terms |
|
1475
|
93718 |
Yes |
get_head_by_relationship_type |
|
1502
|
10 |
Yes |
get_tail_by_relationship_type |
|
1528
|
4 |
Yes |
get_root_terms |
|
1532
|
54 |
n/a |
__ANON__ |
|
1566
|
34 |
Yes |
get_number_of_terms |
|
1580
|
10 |
Yes |
get_number_of_instances |
|
1594
|
43 |
Yes |
get_number_of_relationships |
|
1608
|
8 |
Yes |
get_number_of_relationship_types |
|
1620
|
8 |
Yes |
export2obo |
|
1790
|
536 |
n/a |
__ANON__ |
|
1801
|
647 |
n/a |
__ANON__ |
|
1851
|
446 |
n/a |
__ANON__ |
|
1989
|
0 |
n/a |
__ANON__ |
|
2055
|
0 |
n/a |
__ANON__ |
|
2187
|
41 |
n/a |
__ANON__ |
|
2366
|
2 |
Yes |
export2rdf |
|
2511
|
620 |
n/a |
__ANON__ |
|
2528
|
1512 |
n/a |
__ANON__ |
|
2577
|
514 |
n/a |
__ANON__ |
|
2751
|
32 |
n/a |
__ANON__ |
|
2931
|
2 |
Yes |
export2owl |
|
3157
|
560 |
n/a |
__ANON__ |
|
3244
|
370 |
n/a |
__ANON__ |
|
3381
|
28 |
n/a |
__ANON__ |
|
3459
|
2 |
Yes |
export2xml |
|
3657
|
522 |
n/a |
__ANON__ |
|
3668
|
564 |
n/a |
__ANON__ |
|
3712
|
372 |
n/a |
__ANON__ |
|
3872
|
32 |
n/a |
__ANON__ |
|
4029
|
2 |
Yes |
export2dot |
|
4051
|
560 |
n/a |
__ANON__ |
|
4071
|
370 |
n/a |
__ANON__ |
|
4099
|
0 |
Yes |
export2gml |
|
4150
|
0 |
n/a |
__ANON__ |
|
4204
|
16 |
Yes |
export |
|
4282
|
1 |
Yes |
subontology_by_terms |
|
4330
|
3 |
Yes |
get_subontology_from |
|
4388
|
11 |
Yes |
get_terms_idspace |
|
4395
|
1322 |
n/a |
__ANON__ |
|
4415
|
2 |
Yes |
get_instances_idspace |
|
4441
|
12 |
Yes |
get_descendent_terms |
|
4470
|
5 |
Yes |
get_ancestor_terms |
|
4495
|
4 |
Yes |
get_descendent_terms_by_subnamespace |
|
4521
|
4 |
Yes |
get_ancestor_terms_by_subnamespace |
|
4547
|
4 |
Yes |
get_descendent_terms_by_relationship_type |
|
4573
|
4 |
Yes |
get_ancestor_terms_by_relationship_type |
|
4599
|
3 |
Yes |
get_term_by_xref |
|
4622
|
3 |
Yes |
get_instance_by_xref |
|
4644
|
626 |
Yes |
get_paths_term1_term2 |
|
4646
|
1797 |
n/a |
__ANON__ |
|
4669
|
9500 |
n/a |
__ANON__ |
|
4670
|
28390 |
n/a |
__ANON__ |
|
4677
|
10490 |
n/a |
__ANON__ |
|
4767
|
102 |
Yes |
get_paths_term_terms |
|
4892
|
141 |
Yes |
get_paths_term_terms_same_rel |
|
5023
|
3473 |
Yes |
obo_id2owl_id |
|
5037
|
0 |
Yes |
owl_id2obo_id |
|
5042
|
12 |
n/a |
__date |
|
5048
|
0 |
n/a |
__dfs |
|
5134
|
13667 |
n/a |
__get_name_without_whitespaces |
|
5140
|
0 |
n/a |
__idspace_as_string |
|
5168
|
2848 |
n/a |
__sort_by |
|
5177
|
129368 |
n/a |
__sort_by_id |
|
5186
|
1996 |
n/a |
__print_hasDbXref_for_owl |
|
5223
|
6775 |
n/a |
__char_hex_http |