Subroutine Coverage
| blib/lib/FASTX/Seq.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
34 |
36 |
94.4
|
| pod |
29 |
29 |
100.0
|
| line |
count |
pod |
subroutine |
|
4
|
46 |
n/a |
BEGIN |
|
5
|
46 |
n/a |
BEGIN |
|
6
|
46 |
n/a |
BEGIN |
|
7
|
46 |
n/a |
BEGIN |
|
9
|
46 |
n/a |
BEGIN |
|
21
|
81 |
Yes |
new |
|
86
|
10 |
Yes |
copy |
|
97
|
93 |
Yes |
seq |
|
106
|
14 |
Yes |
name |
|
115
|
56 |
Yes |
qual |
|
123
|
11 |
Yes |
comment |
|
131
|
29 |
Yes |
offset |
|
140
|
20 |
Yes |
line_len |
|
149
|
10 |
Yes |
default_quality |
|
158
|
23 |
Yes |
len |
|
168
|
2 |
Yes |
rev |
|
178
|
1 |
Yes |
rc |
|
192
|
7 |
Yes |
slice |
|
207
|
42 |
Yes |
char2qual |
|
216
|
2 |
Yes |
qual2char |
|
225
|
5 |
Yes |
qualities |
|
237
|
1 |
Yes |
min_qual |
|
247
|
1 |
Yes |
max_qual |
|
256
|
1 |
Yes |
trim_after |
|
276
|
1 |
Yes |
trim_until |
|
295
|
22 |
n/a |
_kmer2num |
|
316
|
5 |
Yes |
translate |
|
382
|
0 |
Yes |
string |
|
394
|
0 |
Yes |
as_string |
|
402
|
15 |
Yes |
asfasta |
|
412
|
25 |
Yes |
asfastq |
|
440
|
5 |
Yes |
as_fasta |
|
447
|
10 |
Yes |
as_fastq |
|
454
|
13 |
Yes |
is_fasta |
|
461
|
7 |
Yes |
is_fastq |
|
467
|
15 |
n/a |
_split_string |