| blib/lib/FASTX/ScriptHelper.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % | 
| condition | 11 | 32 | 34.3 | 
| line | !l | l&&!r | l&&r | condition | 
|---|---|---|---|---|
| 165 | 2 | 0 | 0 | defined $reference and &reftype($reference) eq undef | 
| 181 | 0 | 0 | 2 | defined $self and $self->{'verbose'} | 
| 0 | 0 | 0 | defined $main::opt_verbose and $main::opt_verbose | 
| line | l | !l | condition | 
|---|---|---|---|
| 48 | 2 | 0 | $args->{'logfile'} // undef | 
| 0 | 2 | $args->{'debug'} // 0 | |
| 2 | 0 | $args->{'verbose'} // 0 | |
| 2 | 0 | $args->{'linesize'} // 0 | |
| 148 | 0 | 0 | ($self->{'linesize'} // $main::opt_line_size) // 0 | 
| 179 | 0 | 2 | $reference_name // "data" | 
| 205 | 0 | 3 | $reference_name // "data" | 
| line | l | !l&&r | !l&&!r | condition | 
|---|---|---|---|---|
| 55 | 2 | 0 | 0 | "$object->{'logfile'}" || confess("ERROR: Unable to write log file to $object->{'logfile'}\n") | 
| 148 | 2 | 0 | 0 | $self->{'linesize'} // $main::opt_line_size | 
| 181 | 2 | 0 | 0 | defined $self and $self->{'verbose'} or defined $main::opt_verbose and $main::opt_verbose |