Subroutine Coverage
| blib/lib/FASTX/Seq.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
34 |
36 |
94.4
|
| pod |
29 |
29 |
100.0
|
| line |
count |
pod |
subroutine |
|
4
|
46 |
n/a |
BEGIN |
|
5
|
46 |
n/a |
BEGIN |
|
6
|
46 |
n/a |
BEGIN |
|
7
|
46 |
n/a |
BEGIN |
|
9
|
46 |
n/a |
BEGIN |
|
21
|
76 |
Yes |
new |
|
84
|
6 |
Yes |
copy |
|
95
|
77 |
Yes |
seq |
|
104
|
10 |
Yes |
name |
|
113
|
48 |
Yes |
qual |
|
121
|
7 |
Yes |
comment |
|
129
|
21 |
Yes |
offset |
|
138
|
12 |
Yes |
line_len |
|
147
|
6 |
Yes |
default_quality |
|
156
|
23 |
Yes |
len |
|
166
|
2 |
Yes |
rev |
|
176
|
1 |
Yes |
rc |
|
190
|
7 |
Yes |
slice |
|
205
|
42 |
Yes |
char2qual |
|
214
|
2 |
Yes |
qual2char |
|
223
|
5 |
Yes |
qualities |
|
235
|
1 |
Yes |
min_qual |
|
245
|
1 |
Yes |
max_qual |
|
254
|
1 |
Yes |
trim_after |
|
274
|
1 |
Yes |
trim_until |
|
293
|
2 |
n/a |
_kmer2num |
|
314
|
1 |
Yes |
translate |
|
380
|
0 |
Yes |
string |
|
392
|
0 |
Yes |
as_string |
|
400
|
15 |
Yes |
asfasta |
|
410
|
25 |
Yes |
asfastq |
|
438
|
5 |
Yes |
as_fasta |
|
445
|
10 |
Yes |
as_fastq |
|
452
|
13 |
Yes |
is_fasta |
|
459
|
7 |
Yes |
is_fastq |
|
465
|
15 |
n/a |
_split_string |