| blib/lib/Bio/Tools/Run/Newbler.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 5 | 22 | 22.7 |
| line | true | false | branch |
|---|---|---|---|
| 200 | 1 | 0 | unless defined $self->program_name |
| 220 | 0 | 4 | if (not $seqs) { } |
| 224 | 0 | 4 | if (ref($seqs) =~ /ARRAY/i) { } |
| 226 | 0 | 0 | unless ($seq->isa('Bio::PrimarySeqI') or $seq->isa('Bio::SeqI')) |
| 233 | 0 | 4 | if (not defined $file_or_dir) { } |
| 236 | 0 | 4 | unless (-e $file_or_dir) |
| 323 | 0 | 0 | if ($self->verbose >= 0) |
| 330 | 0 | 0 | if ($ref and $ref eq 'SCALAR') { } |
| 342 | 0 | 0 | unless IPC::Run::run(@ipc_args) |
| 345 | 0 | 0 | if ($@) |
| 374 | 0 | 0 | unless move($ace_file, $output_file) |