| line |
true |
false |
branch |
|
98
|
3 |
60 |
if $entry =~ m[//] |
|
99
|
48 |
12 |
if ($entry =~ /Name:\s+(\S+)/) |
|
109
|
0 |
276 |
if $entry =~ /^\s+(\d+)/ |
|
110
|
240 |
36 |
if ($entry =~ /^\s*(\S+)\s+(.*)$/) |
|
113
|
0 |
240 |
unless (exists $hash{$name}) |
|
122
|
0 |
3 |
if @names < 1 |
|
127
|
48 |
0 |
if ($name =~ m[(\S+)/(\d+)-(\d+)]) { } |
|
152
|
3 |
0 |
if $aln->num_sequences |
|
177
|
0 |
2 |
unless ($aln and $aln->isa('Bio::Align::AlignI')) |
|
187
|
0 |
2 |
unless (defined $name) |
|
194
|
1 |
1 |
$maxname > 20 ? : |
|
195
|
1 |
1 |
$maxname > 20 ? : |
|
230
|
22 |
112 |
if ($index < 5) |
|
242
|
2 |
0 |
if $self->_flush_on_write and defined $self->_fh |