| line |
!l |
l&&!r |
l&&r |
condition |
|
208
|
0 |
0 |
0 |
$self->allele_ori eq $self->allele_mut and length $self->allele_ori == 1 |
|
215
|
0 |
0 |
0 |
$self->allele_ori eq 'c' and substr($self->upStreamSeq, 0, 1) eq 'g' |
|
|
0 |
0 |
0 |
$self->allele_ori eq 'g' and substr($self->dnStreamSeq, -1, 1) eq 'c' |
|
283
|
0 |
12 |
78 |
$self->allele_ori and $self->allele_ori->seq |
|
284
|
0 |
12 |
78 |
$self->allele_mut and $self->allele_mut->seq |
|
286
|
12 |
12 |
66 |
$o and $m |
|
|
24 |
6 |
60 |
$o and $m and length $o == length $m |
|
|
18 |
0 |
60 |
$o and $m and length $o == length $m and length $o == 1 |
|
357
|
0 |
0 |
17 |
$self->SeqDiff and $self->SeqDiff->alphabet |
|
|
0 |
13 |
4 |
$self->SeqDiff and $self->SeqDiff->alphabet and $self->SeqDiff->alphabet eq 'dna' |
|
|
0 |
0 |
13 |
$self->SeqDiff->alphabet and $self->SeqDiff->alphabet eq 'rna' |