| Bio/SeqIO/agave.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 11 | 45 | 24.4 |
| pod | 4 | 4 | 100.0 |
| line | count | pod | subroutine |
|---|---|---|---|
| 95 | 1 | n/a | BEGIN |
| 97 | 1 | n/a | BEGIN |
| 100 | 1 | n/a | BEGIN |
| 101 | 1 | n/a | BEGIN |
| 102 | 1 | n/a | BEGIN |
| 103 | 1 | n/a | BEGIN |
| 104 | 1 | n/a | BEGIN |
| 105 | 1 | n/a | BEGIN |
| 107 | 1 | n/a | BEGIN |
| 109 | 1 | n/a | BEGIN |
| 111 | 1 | n/a | BEGIN |
| 116 | 0 | n/a | _initialize |
| 149 | 0 | n/a | _process |
| 208 | 0 | n/a | _process_sciobj |
| 245 | 0 | n/a | _process_contig |
| 281 | 0 | n/a | _process_fragment_order |
| 328 | 0 | n/a | _process_fragment_orientation |
| 379 | 0 | n/a | _process_bio_sequence |
| 449 | 0 | n/a | _process_xrefs |
| 517 | 0 | n/a | _process_xref |
| 552 | 0 | n/a | _process_sequence_map |
| 606 | 0 | n/a | _process_annotations |
| 673 | 0 | n/a | _process_seq_feature |
| 757 | 0 | n/a | _process_qualifier |
| 788 | 0 | n/a | _process_classification |
| 812 | 0 | n/a | _process_evidence |
| 841 | 0 | n/a | _process_comp_result |
| 875 | 0 | n/a | _process_related_annot |
| 918 | 0 | n/a | _process_result_group |
| 953 | 0 | n/a | _process_match_region |
| 985 | 0 | n/a | _process_query_region |
| 1031 | 0 | n/a | _tag_processing_helper |
| 1069 | 0 | n/a | _one_tag |
| 1116 | 0 | n/a | _question_mark_tag |
| 1145 | 0 | n/a | _star_tag |
| 1182 | 0 | n/a | _plus_tag |
| 1226 | 0 | n/a | _helper_store_attribute_list |
| 1264 | 0 | n/a | _store_seqs |
| 1444 | 0 | Yes | next_seq |
| 1476 | 0 | Yes | next_primary_seq |
| 1495 | 0 | Yes | write_seq |
| 1517 | 0 | n/a | _write_each_record |
| 1703 | 0 | n/a | _write_seqfeature |
| 1762 | 0 | n/a | _filehandle |
| 1785 | 0 | Yes | throw |