| line |
true |
false |
branch |
|
208
|
181 |
61 |
if defined $algo |
|
209
|
136 |
106 |
if defined $algo_v |
|
210
|
69 |
173 |
if defined $algo_r |
|
212
|
9 |
233 |
if defined $rid |
|
214
|
173 |
69 |
if defined $qname |
|
215
|
113 |
129 |
if defined $qacc |
|
216
|
135 |
107 |
if defined $qdesc |
|
217
|
146 |
96 |
if defined $qlen |
|
218
|
0 |
242 |
if defined $qgi |
|
219
|
105 |
137 |
if defined $dbname |
|
220
|
95 |
147 |
if defined $dblet |
|
221
|
94 |
148 |
if defined $dbent |
|
223
|
0 |
242 |
if defined $hit_factory |
|
225
|
93 |
149 |
if (defined $params) |
|
226
|
0 |
93 |
unless (ref($params) =~ /hash/i) |
|
234
|
93 |
149 |
if (defined $stats) |
|
235
|
0 |
93 |
unless (ref($stats) =~ /hash/i) |
|
244
|
84 |
158 |
if (defined $hits) |
|
245
|
0 |
84 |
unless ref($hits) =~ /array/i |
|
267
|
242 |
127 |
if (defined $value or not defined $previous) |
|
268
|
0 |
242 |
unless defined $value |
|
287
|
136 |
50 |
if (defined $value or not defined $previous) |
|
288
|
0 |
136 |
unless defined $value |
|
314
|
0 |
1198 |
if $index > scalar @{$self->{'_hits'};} |
|
317
|
1175 |
23 |
if (ref $hit eq 'HASH') |
|
340
|
238 |
153 |
if (defined $value or not defined $previous) |
|
341
|
4 |
234 |
unless defined $value |
|
360
|
176 |
17 |
if (defined $value or not defined $previous) |
|
361
|
2 |
174 |
unless defined $value |
|
380
|
0 |
8 |
if (defined $value) { } |
|
383
|
8 |
0 |
$self->query_name =~ /^gi\|(\d+)/ ? : |
|
402
|
149 |
112 |
if (defined $value or not defined $previous) |
|
403
|
3 |
146 |
unless defined $value |
|
423
|
205 |
28 |
if (defined $value or not defined $previous) |
|
424
|
9 |
196 |
unless defined $value |
|
445
|
105 |
35 |
if (defined $value or not defined $previous) |
|
446
|
0 |
105 |
unless defined $value |
|
468
|
99 |
27 |
if (defined $value or not defined $previous) |
|
469
|
4 |
95 |
unless defined $value |
|
490
|
99 |
25 |
if (defined $value or not defined $previous) |
|
491
|
5 |
94 |
unless defined $value |
|
576
|
4743 |
0 |
if (ref $s eq 'HASH' or $s->isa('Bio::Search::Hit::HitI')) { } |
|
583
|
4680 |
63 |
if (ref $s eq 'HASH') |
|
601
|
180 |
1257 |
if (@_) |
|
682
|
0 |
32 |
unless (defined $self->{'_hits'}) |
|
703
|
0 |
5 |
unless $self->{'_hashes'} |
|
710
|
5 |
0 |
if (ref $self->{'_hits'}) |
|
730
|
69 |
40 |
if (defined $value) |
|
765
|
9 |
5 |
if (defined $value) |