Subroutine Coverage
| Bio/OntologyIO/dagflat.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
40 |
41 |
97.5
|
| pod |
5 |
7 |
71.4
|
| line |
count |
pod |
subroutine |
|
113
|
2 |
n/a |
BEGIN |
|
115
|
2 |
n/a |
BEGIN |
|
116
|
2 |
n/a |
BEGIN |
|
117
|
2 |
n/a |
BEGIN |
|
118
|
2 |
n/a |
BEGIN |
|
119
|
2 |
n/a |
BEGIN |
|
120
|
2 |
n/a |
BEGIN |
|
122
|
2 |
n/a |
BEGIN |
|
123
|
2 |
n/a |
BEGIN |
|
126
|
2 |
n/a |
BEGIN |
|
166
|
4 |
n/a |
_initialize |
|
228
|
14 |
Yes |
ontology_name |
|
252
|
4 |
Yes |
parse |
|
326
|
5 |
Yes |
next_ontology |
|
353
|
2 |
Yes |
defs_file |
|
367
|
0 |
No |
defs_url |
|
379
|
1 |
No |
url |
|
407
|
4 |
Yes |
close |
|
432
|
6 |
n/a |
_flat_files |
|
455
|
85 |
n/a |
_defs_io |
|
462
|
4 |
n/a |
_add_ontology |
|
476
|
227 |
n/a |
_add_term |
|
485
|
51 |
n/a |
_part_of_relationship |
|
494
|
211 |
n/a |
_is_a_relationship |
|
501
|
4 |
n/a |
_related_to_relationship |
|
510
|
254 |
n/a |
_add_relationship |
|
522
|
258 |
n/a |
_has_term |
|
531
|
4 |
n/a |
_parse_flat_file |
|
679
|
258 |
n/a |
_get_first_termid |
|
694
|
218 |
n/a |
_get_name |
|
720
|
222 |
n/a |
_get_synonyms |
|
738
|
222 |
n/a |
_get_db_cross_refs |
|
761
|
222 |
n/a |
_get_secondary_termids |
|
776
|
222 |
n/a |
_count_spaces |
|
789
|
13 |
n/a |
_next_term |
|
837
|
1239 |
n/a |
_ont_engine |
|
850
|
227 |
n/a |
_create_ont_entry |
|
870
|
15 |
n/a |
_not_first_record |
|
883
|
19 |
n/a |
_done |
|
895
|
22 |
n/a |
_term |
|
906
|
449 |
n/a |
_to_annotation |