| Bio/Map/GeneMap.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| condition | 20 | 39 | 51.2 |
| line | !l | l&&!r | l&&r | condition |
|---|---|---|---|---|
| 170 | 0 | 0 | 9 | defined $gene and defined $species |
| 229 | 20 | 0 | 0 | $uid and defined $Bio::Map::GeneMap::GENEMAPS->{'by_uid'}{$uid} |
| 0 | 0 | 20 | $gene and $species | |
| 500 | 0 | 0 | 0 | $new_slice and my $seq_str = $new_slice->seq |
| 551 | 0 | 3 | 1 | $start and ref $start |
| 3 | 0 | 1 | $start and ref $start and $start->isa('Bio::RangeI') |
| line | l | !l | condition |
|---|---|---|---|
| 285 | 0 | 9 | $self->universal_name || (return $value) |
| 353 | 7 | 2 | $up ||= 1000 |
| 357 | 0 | 9 | $down || 0 |
| 433 | 0 | 20 | $self->{'_downstream'} || 0 |
| 478 | 6 | 1 | $seq || '' |
| 481 | 60 | 7846 | shift @have || 'N' |
| 488 | 0 | 0 | $seq or '' |
| 504 | 0 | 0 | $seq || '' |
| 510 | 1 | 7 | $pos->seq(undef, undef, 1) || (next) |
| line | l | !l&&r | !l&&!r | condition |
|---|---|---|---|---|
| 477 | 1 | 6 | 0 | not $seq or CORE::length $seq < $expected_length |