Subroutine Coverage
| blib/lib/Bio/Tools/Run/Alignment/TCoffee.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
19 |
27 |
70.3
|
| pod |
10 |
10 |
100.0
|
| line |
count |
pod |
subroutine |
|
3
|
1 |
n/a |
BEGIN |
|
4
|
1 |
n/a |
BEGIN |
|
5
|
1 |
n/a |
BEGIN |
|
9
|
1 |
n/a |
BEGIN |
|
11
|
1 |
n/a |
BEGIN |
|
12
|
1 |
n/a |
BEGIN |
|
13
|
1 |
n/a |
BEGIN |
|
14
|
1 |
n/a |
BEGIN |
|
15
|
1 |
n/a |
BEGIN |
|
16
|
1 |
n/a |
BEGIN |
|
17
|
1 |
n/a |
BEGIN |
|
18
|
1 |
n/a |
BEGIN |
|
41
|
1 |
n/a |
BEGIN |
|
69
|
6 |
Yes |
program_name |
|
74
|
3 |
Yes |
program_dir |
|
78
|
1 |
Yes |
new |
|
97
|
7 |
n/a |
AUTOLOAD |
|
111
|
0 |
Yes |
error_string |
|
121
|
1 |
Yes |
version |
|
132
|
0 |
Yes |
run |
|
149
|
0 |
Yes |
align |
|
167
|
0 |
Yes |
profile_align |
|
200
|
0 |
n/a |
_run |
|
295
|
0 |
n/a |
_setinput |
|
417
|
0 |
n/a |
_setparams |
|
462
|
0 |
Yes |
aformat |
|
470
|
2 |
Yes |
methods |