| lib/Bio/MLST/CheckMultipleSpecies.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| condition | 4 | 21 | 19.0 |
| line | !l | l&&!r | l&&r | condition |
|---|---|---|---|---|
| 165 | 0 | 0 | 0 | $row[0] eq 'Isolate' and $row[1] eq 'ST' |
| 191 | 0 | 0 | 0 | @positive_rows || $previous_positive_result and $i > 1 |
| 196 | 0 | 0 | 0 | $previous_positive_result and $i > 1 |
| 211 | 4 | 0 | 0 | $self->verbose and $file_type eq 'allele' |
| line | l | !l&&r | !l&&!r | condition |
|---|---|---|---|---|
| 72 | 1 | 0 | 5 | $self->output_fasta_files or $self->output_phylip_files |
| 191 | 0 | 0 | 0 | @positive_rows || $previous_positive_result |
| 215 | 0 | 0 | 2 | $self->report_all_mlst_db or $results_found_flag |