| blib/lib/Bio/GeneDesign/Codons.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 21 | 27 | 77.7 |
| pod | n/a | ||
| line | count | pod | subroutine |
|---|---|---|---|
| 26 | 11 | n/a | BEGIN |
| 27 | 11 | n/a | BEGIN |
| 28 | 11 | n/a | BEGIN |
| 29 | 11 | n/a | BEGIN |
| 30 | 11 | n/a | BEGIN |
| 31 | 11 | n/a | BEGIN |
| 33 | 11 | n/a | BEGIN |
| 34 | 11 | n/a | BEGIN |
| 38 | 11 | n/a | BEGIN |
| 70 | 0 | n/a | _parse_organisms |
| 96 | 14 | n/a | _parse_codon_file |
| 132 | 7 | n/a | _reverse_codon_table |
| 152 | 15 | n/a | _translate |
| 180 | 4 | n/a | _subtract |
| 256 | 193 | n/a | _rscu_sum |
| 279 | 3 | n/a | _codon_count |
| 303 | 1 | n/a | _generate_RSCU_table |
| 327 | 0 | n/a | _generate_codon_report |
| 357 | 0 | n/a | _generate_codon_file |
| 381 | 14 | n/a | _define_codons |
| 410 | 37 | n/a | _amb_translation |
| 469 | 88 | n/a | _degcodon_to_aas |
| 497 | 0 | n/a | _find_in_frame |
| 526 | 0 | n/a | _minimize_local_alignment_dp |
| 625 | 3 | n/a | _pattern_aligner |
| 672 | 1 | n/a | _pattern_adder |
| 714 | 0 | n/a | _codon_change_type |