| line |
true |
false |
branch |
|
37
|
0 |
0 |
if (-f $file)
|
|
43
|
0 |
0 |
unless defined $db
|
|
62
|
0 |
0 |
if ($seq_sys_rs) { }
|
|
66
|
0 |
0 |
if ($quality_rs)
|
|
76
|
0 |
0 |
unless ($type =~ /^(fastq|raw)$/)
|
|
91
|
0 |
0 |
unless ($seq_sys_rs)
|
|
151
|
0 |
0 |
unless defined(my $entry = readline $fh)
|
|
158
|
0 |
0 |
unless ($stack[0] =~ /^\@/ and $stack[2] =~ /^\+/)
|
|
162
|
0 |
0 |
if (length $stack[3] != $size)
|
|
177
|
0 |
0 |
if (length $entry != $size)
|
|
188
|
0 |
0 |
$num_left < 1000 ? :
|
|
198
|
0 |
0 |
if ($rand < $picks_left)
|
|
201
|
0 |
0 |
if (++$acm % int($picks / 10) == 0)
|
|
210
|
0 |
0 |
unless $fh->close
|
|
229
|
0 |
0 |
unless defined $seq_sys_rs
|
|
232
|
0 |
0 |
unless defined $quality_rs
|
|
236
|
0 |
0 |
unless defined $compressed
|
|
249
|
0 |
0 |
unless defined $seq_sys_rs
|
|
254
|
0 |
0 |
unless defined $quality_rs
|
|
255
|
0 |
0 |
unless $quality_rs->is_user_provided
|
|
263
|
0 |
0 |
unless $seq_sys_rs->search_related('qualities', undef)->single
|
|
281
|
0 |
0 |
if ($entry) { }
|
|
333
|
0 |
0 |
$quality->is_user_provided ? :
|