| line |
!l |
l&&!r |
l&&r |
condition |
|
99
|
162 |
0 |
6 |
$in_fh->eof and $content eq '' |
|
106
|
144 |
0 |
18 |
$line eq '' || $line =~ /^\s+$/ and $content ne '' |
|
276
|
27 |
4 |
2 |
$opt->{'nocomplex'} and $site->{'indel_freq'} == -1 |
|
280
|
25 |
2 |
4 |
$opt->{'nosingle'} and $site->{'indel_freq'} <= 1 |
|
288
|
15 |
2 |
4 |
defined $opt->{'min'} and $site->{'indel_freq'} / $seq_count < $opt->{'min'} |
|
291
|
15 |
2 |
0 |
defined $opt->{'max'} and $site->{'indel_freq'} / $seq_count > $opt->{'max'} |
|
300
|
368 |
73 |
7 |
$opt->{'nocomplex'} and $site->{'snp_freq'} == -1 |
|
304
|
361 |
17 |
63 |
$opt->{'nosingle'} and $site->{'snp_freq'} <= 1 |
|
308
|
298 |
17 |
63 |
defined $opt->{'min'} and $site->{'snp_freq'} / $seq_count < $opt->{'min'} |
|
311
|
298 |
17 |
0 |
defined $opt->{'max'} and $site->{'snp_freq'} / $seq_count > $opt->{'max'} |