| blib/lib/AlignDB/GC.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| condition | 27 | 42 | 64.2 |
| line | !l | l&&!r | l&&r | condition |
|---|---|---|---|---|
| 135 | 0 | 0 | 2 | $midleft_parent_idx and $midright_parent_idx |
| 247 | 19 | 5 | 0 | $right_low and $right_high |
| 286 | 17 | 5 | 2 | $left_low and $left_high |
| 305 | 20 | 1 | 3 | $left_flag eq 'H' and $right_flag eq 'H' |
| 16 | 1 | 4 | $left_flag eq 'L' and $right_flag eq 'L' | |
| 415 | 0 | 0 | 0 | &List::Util::max($gc1, $gc2) < &List::Util::max($gc, $gc3) and &List::Util::min($gc1, $gc2) > &List::Util::min($gc, $gc3) |
| 446 | 2 | 0 | 0 | abs $gc1 - $gc < $fall_range and abs $gc2 - $gc1 < $fall_range |
| line | l | !l&&r | !l&&!r | condition |
|---|---|---|---|---|
| 40 | 8 | 3 | 0 | shift() || $self->wave_window_size |
| 41 | 8 | 3 | 0 | shift() || $self->wave_window_step |
| 91 | 2 | 4 | 0 | shift() || $self->stat_window_size |
| 92 | 2 | 4 | 0 | shift() || $self->stat_window_step |
| 114 | 0 | 0 | 6 | $gc_mean == 0 || $gc_mean == 1 |
| 335 | 11 | 17 | 140 | $flag eq 'T' or $flag eq 'C' |
| 470 | 0 | 1 | 23 | $flag eq 'T' or $flag eq 'C' |