| line |
count |
pod |
subroutine |
|
140
|
14 |
n/a |
BEGIN |
|
141
|
14 |
n/a |
BEGIN |
|
142
|
14 |
n/a |
BEGIN |
|
143
|
14 |
n/a |
BEGIN |
|
144
|
14 |
n/a |
BEGIN |
|
145
|
14 |
n/a |
BEGIN |
|
146
|
14 |
n/a |
BEGIN |
|
147
|
14 |
n/a |
BEGIN |
|
148
|
14 |
n/a |
BEGIN |
|
149
|
14 |
n/a |
BEGIN |
|
150
|
14 |
n/a |
BEGIN |
|
151
|
14 |
n/a |
BEGIN |
|
152
|
14 |
n/a |
BEGIN |
|
153
|
14 |
n/a |
BEGIN |
|
155
|
14 |
n/a |
BEGIN |
|
159
|
15 |
n/a |
_valid_params |
|
176
|
28 |
n/a |
_initialize |
|
190
|
0 |
No |
clone |
|
234
|
8 |
Yes |
create_iterator |
|
259
|
0 |
Yes |
iterate |
|
295
|
5 |
No |
node_filter |
|
336
|
5 |
Yes |
term_query |
|
385
|
1 |
Yes |
subgraph |
|
408
|
1 |
Yes |
subgraph_by_terms |
|
453
|
12 |
Yes |
get_all_nodes |
|
485
|
5216 |
Yes |
get_term |
|
517
|
1 |
Yes |
get_term_by_name |
|
545
|
0 |
Yes |
get_terms_by_subset |
|
568
|
7 |
Yes |
get_top_nodes |
|
604
|
0 |
Yes |
get_leaf_nodes |
|
633
|
0 |
Yes |
is_leaf_node |
|
659
|
0 |
Yes |
seed_nodes |
|
684
|
0 |
Yes |
focus_nodes |
|
699
|
0 |
Yes |
is_focus_node |
|
720
|
0 |
Yes |
add_focus_node |
|
778
|
2 |
Yes |
paths_to_top |
|
827
|
1 |
Yes |
node_count |
|
847
|
0 |
Yes |
n_associations |
|
876
|
0 |
Yes |
n_deep_associations |
|
900
|
0 |
Yes |
n_children |
|
947
|
0 |
Yes |
n_parents |
|
982
|
1843 |
Yes |
association_list |
|
1006
|
829 |
Yes |
get_direct_associations |
|
1028
|
1014 |
Yes |
deep_association_list |
|
1052
|
0 |
Yes |
product_list |
|
1083
|
1 |
Yes |
deep_product_list |
|
1114
|
0 |
Yes |
deep_product_count |
|
1134
|
97 |
Yes |
get_relationships |
|
1160
|
614 |
Yes |
get_parent_relationships |
|
1194
|
1618 |
Yes |
get_child_relationships |
|
1224
|
0 |
Yes |
get_all_relationships |
|
1234
|
2232 |
No |
get_acc_relationships |
|
1257
|
100 |
Yes |
get_parent_terms |
|
1277
|
1 |
Yes |
get_parent_terms_by_type |
|
1299
|
1 |
Yes |
get_recursive_parent_terms |
|
1324
|
1 |
Yes |
get_recursive_parent_terms_by_type |
|
1348
|
0 |
Yes |
get_reflexive_parent_terms |
|
1370
|
0 |
Yes |
get_reflexive_parent_terms_by_type |
|
1388
|
1029 |
Yes |
get_child_terms |
|
1406
|
0 |
Yes |
get_child_terms_by_type |
|
1428
|
1 |
Yes |
get_recursive_child_terms |
|
1452
|
1 |
Yes |
get_recursive_child_terms_by_type |
|
1480
|
13 |
n/a |
_get_recursive_related_terms_by_type |
|
1527
|
1130 |
n/a |
_get_related_terms_by_type |
|
1563
|
0 |
Yes |
get_parent_accs_by_type |
|
1587
|
0 |
Yes |
get_reflexive_parent_accs_by_type |
|
1606
|
0 |
Yes |
get_relationships_between_terms |
|
1628
|
0 |
Yes |
get_parent_closure_hash_by_type |
|
1644
|
0 |
Yes |
add_child_relationship |
|
1661
|
0 |
Yes |
add_parent_relationship |
|
1681
|
0 |
Yes |
close_below |
|
1714
|
0 |
No |
delete_node |
|
1764
|
0 |
No |
category_term |
|
1792
|
1 |
Yes |
find_roots |
|
1819
|
0 |
Yes |
get_all_products |
|
1832
|
0 |
No |
find_path |
|
1836
|
0 |
No |
build_matrix |
|
1855
|
0 |
No |
parent_dist |
|
1887
|
0 |
Yes |
merge |
|
1909
|
0 |
No |
to_lisp |
|
1948
|
0 |
No |
lisp2text |
|
1962
|
0 |
No |
to_ptuples |
|
2001
|
0 |
Yes |
export |
|
2039
|
0 |
Yes |
to_xml |
|
2049
|
0 |
No |
to_obo |
|
2058
|
0 |
No |
add_path |
|
2080
|
1420 |
Yes |
add_term |
|
2124
|
743 |
Yes |
add_relationship |
|
2223
|
0 |
No |
get_term_properties |
|
2234
|
0 |
No |
get_all_properties |
|
2242
|
0 |
No |
cross_product_index |
|
2249
|
0 |
No |
add_cross_product |
|
2268
|
0 |
No |
get_cross_product |
|
2274
|
0 |
No |
get_term_by_cross_product |
|
2290
|
0 |
No |
create_subgraph_by_term_type |
|
2307
|
0 |
No |
add_trailing_edge |
|
2320
|
0 |
No |
infer_logical_definitions |
|
2342
|
0 |
No |
infer_logical_definition_for_term |
|
2370
|
0 |
No |
set_category |
|
2374
|
0 |
No |
add_obsolete_pointer |
|
2378
|
0 |
No |
add_synonym |
|
2382
|
0 |
No |
add_dbxref |
|
2387
|
0 |
No |
tab |
|
2393
|
4 |
n/a |
_rel_prefix |
|
2413
|
0 |
Yes |
add_buckets |
|
2451
|
1 |
Yes |
to_text_output |
|
2609
|
0 |
No |
delete_node_with_reconnect |
|
2645
|
0 |
No |
DEPRECATED_sub_graph |
|
2666
|
0 |
No |
max_depth |
|
2682
|
0 |
No |
split_graph_by_re |
|
2684
|
0 |
n/a |
__ANON__ |
|
2689
|
0 |
No |
split_graph_by_func |
|
2746
|
0 |
No |
store |
|
2761
|
0 |
No |
graphify |