| line |
true |
false |
branch |
|
26
|
0 |
3 |
exists $data->[0]{'subject'} ? :
|
|
35
|
0 |
5 |
if $self->{'debug'} or $self->{'verbose'}
|
|
57
|
0 |
163 |
if $self->{'verbose'}
|
|
68
|
2856 |
3019 |
if ($j < $i) { }
|
|
|
163 |
2856 |
elsif ($j == $i) { }
|
|
92
|
0 |
5 |
if $self->{'debug'} or $self->{'verbose'}
|
|
109
|
0 |
1 |
if $self->{'debug'} or $self->{'verbose'}
|
|
127
|
0 |
36 |
if $self->{'verbose'}
|
|
129
|
0 |
36 |
if defined $self->{'debug'} and $self->{'debug'} > 1
|
|
156
|
1 |
0 |
$weight ? :
|
|
167
|
123 |
36 |
exists $nomenclature{$_} ? :
|
|
171
|
0 |
1 |
if @sort_keys_glob_hash != @labels
|
|
196
|
0 |
144 |
$sort_by eq 'jaccard' ? :
|
|
201
|
0 |
36 |
if $self->{'verbose'}
|
|
279
|
288 |
180 |
defined $format->{$_}{'format'} ? :
|
|
283
|
36 |
0 |
if (defined $align)
|
|
321
|
36 |
0 |
$weight_bool eq 'True' ? :
|
|
327
|
1 |
35 |
if $count == $max_out
|
|
347
|
0 |
36 |
if $length1 != $length2
|
|
376
|
2582 |
3142 |
if $char1 == 0 and $char2 == 0
|
|
382
|
1056 |
4668 |
if $char1 ne $char2
|
|
384
|
4668 |
1056 |
$char1 eq $char2 ? :
|
|
431
|
0 |
199 |
if $self->{'verbose'}
|
|
477
|
0 |
200 |
if @included and @excluded
|
|
484
|
25 |
175 |
if (@included)
|
|
486
|
75 |
50 |
unless &any(sub {
|
|
491
|
0 |
200 |
if (@excluded)
|
|
493
|
0 |
0 |
if exists $hash->{$key}
|
|
506
|
71 |
129 |
if (exists $hash->{'phenotypicFeatures'})
|
|
508
|
104 |
75 |
$_->{'excluded'} ? :
|
|
541
|
0 |
200 |
unless %$hash
|
|
559
|
756 |
19847 |
unless defined $hash->{$key}
|
|
568
|
11871 |
7976 |
if $regex and $key =~ /$regex/
|
|
572
|
413 |
7563 |
if $key =~ /age|onset/i and not $self->{'age'}
|
|
579
|
1848 |
5715 |
if $val eq "NA" or $val eq "Fake" or $val eq "None:No matching concept" or $val =~ /1900-01-01|NA0000|P999Y|P9999Y|ARRAY|phenopacket_id/
|
|
591
|
0 |
5715 |
if (defined $edges and $val =~ /^HP:/)
|
|
608
|
5715 |
0 |
if ($tmp_key_at_term_level =~ /\./)
|
|
624
|
0 |
5690 |
exists $weight->{$tmp_key_at_term_level} ? :
|
|
|
25 |
5690 |
exists $weight->{$tmp_key} ? :
|
|
632
|
5642 |
73 |
if defined $hash->{$label}
|
|
690
|
5094 |
621 |
if ($key =~ /$array_terms_str/)
|
|
695
|
4964 |
130 |
if (defined $3) { }
|
|
730
|
5577 |
16260 |
exists $cmp_hash->{$individual_id}{$key} ? :
|
|
732
|
5577 |
16260 |
exists $cmp_hash->{$individual_id}{$key} ? :
|