| line |
true |
false |
branch |
|
103
|
0 |
4936 |
unless my $transcript_id = $record->attribute('transcript_id')
|
|
105
|
0 |
4936 |
if ($record->strand == 0)
|
|
112
|
618 |
4318 |
if (not defined $transcript) { }
|
|
127
|
126 |
4192 |
if $record->start < $transcript->start
|
|
128
|
3229 |
1089 |
if $record->stop > $transcript->stop
|
|
131
|
3369 |
1567 |
if ($record->feature eq 'exon') { }
|
|
|
197 |
1370 |
elsif ($record->feature eq 'start_codon') { }
|
|
|
197 |
1173 |
elsif ($record->feature eq 'stop_codon') { }
|
|
136
|
116 |
81 |
if ($record->strand == 1 and !defined($transcript->coding_start) || $record->start < $transcript->coding_start) { }
|
|
|
81 |
0 |
elsif ($record->strand == -1 and !defined($transcript->coding_stop) || $record->stop > $transcript->coding_stop) { }
|
|
150
|
116 |
81 |
if ($record->strand == 1 and !defined($transcript->coding_stop) || $record->stop > $transcript->coding_stop) { }
|
|
|
81 |
0 |
elsif ($record->strand == -1 and !defined($transcript->coding_start) || $record->start < $transcript->coding_start) { }
|