| line |
true |
false |
branch |
|
105
|
0 |
5808 |
unless my $transcript_id = $record->attribute('transcript_id')
|
|
106
|
0 |
5808 |
unless my $gene_id = $record->attribute('gene_id')
|
|
108
|
0 |
5808 |
if ($record->strand == 0)
|
|
115
|
348 |
5460 |
if (not defined $transcript) { }
|
|
127
|
156 |
192 |
if (not exists $genes{$uniq_gene_id}) { }
|
|
141
|
192 |
0 |
if ($gene->contains_position($record->start, 0))
|
|
151
|
0 |
192 |
if ($found == 0)
|
|
165
|
180 |
5280 |
if ($record->start < $transcript->start)
|
|
168
|
3342 |
2118 |
if ($record->stop > $transcript->stop)
|
|
173
|
2982 |
2826 |
if ($record->feature eq 'exon') { }
|
|
|
270 |
2556 |
elsif ($record->feature eq 'start_codon') { }
|
|
|
270 |
2286 |
elsif ($record->feature eq 'stop_codon') { }
|
|
178
|
168 |
102 |
if ($record->strand == 1) { }
|
|
|
102 |
0 |
elsif ($record->strand == -1) { }
|
|
186
|
168 |
102 |
if ($record->strand == 1) { }
|
|
|
102 |
0 |
elsif ($record->strand == -1) { }
|