| line |
true |
false |
branch |
|
41
|
0 |
50262 |
unless (defined $regex)
|
|
43
|
23442 |
26820 |
if (not defined $rx) { }
|
|
49
|
0 |
26820 |
unless (defined $local_regex)
|
|
52
|
18453 |
8367 |
if ($pos_diff > 0) { }
|
|
|
8367 |
0 |
elsif (0 == $pos_diff) { }
|
|
54
|
3900 |
14553 |
if (scalar @rx_groups > 0 and $rx_groups[0]{'position'} == $rx->{'position'} or $pos_diff > 1) { }
|
|
129
|
4983 |
0 |
if (defined $minoffset and length $minoffset > 0)
|
|
132
|
3678 |
1305 |
if (defined $maxoffset and length $maxoffset > 0)
|
|
137
|
4953 |
30 |
if ($maxtmp >= $mintmp) { }
|
|
150
|
4983 |
0 |
if (defined $minoffset and length $minoffset > 0)
|
|
158
|
1299 |
4794 |
if ($maxtmp > $maxresidual) { }
|
|
|
0 |
4794 |
elsif ($maxtmp < 0) { }
|
|
165
|
108 |
5985 |
if ($mintmp > $minresidual) { }
|
|
|
297 |
5688 |
elsif ($mintmp < 0) { }
|
|
173
|
4983 |
1110 |
if ($i == 0) { }
|
|
|
189 |
921 |
elsif ($i == $maxloops) { }
|
|
182
|
27 |
6066 |
if (defined $maxstr and $maxstr > 0 and $minstr > $maxstr) { }
|
|
193
|
1305 |
4788 |
if (not defined $maxoffset or length $maxoffset == 0)
|
|
196
|
0 |
6093 |
if (not defined $minoffset or length $minoffset == 0)
|
|
216
|
21729 |
5091 |
if (defined $minoffset and length $minoffset > 0 and defined $maxoffset and length $maxoffset > 0 and $minoffset == $maxoffset) { }
|
|
|
108 |
4983 |
elsif (!defined($minoffset) || length $minoffset == 0 and !defined($maxoffset) || length $maxoffset == 0) { }
|
|
222
|
4245 |
17484 |
if ($minoffset > 0)
|
|
259
|
6480 |
12183 |
if ($fq->localname eq 'LeftFragment') { }
|
|
|
12183 |
0 |
elsif ($fq->localname eq 'RightFragment') { }
|
|
301
|
471 |
7686 |
if (not defined $direction or length $direction == 0) { }
|
|
|
6885 |
801 |
elsif ($direction eq 'BOFoffset') { }
|
|
|
801 |
0 |
elsif ($direction eq 'EOFoffset') { }
|
|
339
|
276 |
6852 |
if (not defined $reference or 0 == length $reference) { }
|
|
|
6051 |
801 |
elsif ($reference eq 'BOFoffset') { }
|
|
|
801 |
0 |
elsif ($reference eq 'EOFoffset') { }
|
|
449
|
0 |
0 |
if (defined $signatureid)
|
|
459
|
0 |
0 |
if (exists $found_signature_ids{$priority_over_sid})
|
|
541
|
0 |
0 |
if (defined $sig)
|
|
551
|
0 |
0 |
if (defined $sig)
|
|
560
|
0 |
0 |
unless (defined $id)
|
|
574
|
0 |
0 |
unless (defined $internalid)
|
|
590
|
0 |
0 |
unless (defined $internalid)
|
|
592
|
0 |
0 |
if (defined $value)
|
|
599
|
0 |
0 |
unless (defined $internalid)
|
|
612
|
0 |
0 |
unless (defined $internalid)
|
|
684
|
0 |
0 |
if (exists $uniq_regexes{$rx})
|
|
693
|
0 |
0 |
unless (defined $sigid)
|
|
701
|
0 |
0 |
if (0 == scalar @ints) { }
|
|
730
|
0 |
0 |
if (defined $best_quality_internal)
|
|
750
|
0 |
0 |
if (defined $worst_quality_internal)
|
|
807
|
0 |
0 |
unless open my $FH, ">>", "$csv_file"
|
|
808
|
0 |
0 |
unless ($file_exists)
|
|
815
|
0 |
0 |
unless (defined $result)
|
|
841
|
0 |
0 |
if (defined $verbose)
|
|
847
|
0 |
0 |
if (defined $verbose)
|
|
859
|
0 |
0 |
if (defined $verbose)
|
|
869
|
0 |
0 |
if (defined $verbose)
|
|
881
|
0 |
0 |
if (defined $verbose)
|