| line |
true |
false |
branch |
|
26
|
0 |
3 |
defined $args{'verbose'} ? : |
|
30
|
1 |
2 |
if (defined $args{'genome'}) { } |
|
|
1 |
1 |
elsif (defined $args{'crac_index_conf'}) { } |
|
|
1 |
0 |
elsif (defined $args{'sam_reader'}) { } |
|
33
|
2 |
0 |
if (not defined $bit_vectors{$chr}) { } |
|
40
|
0 |
1 |
if $verbose |
|
49
|
24 |
0 |
if (defined $chr_length) { } |
|
50
|
0 |
24 |
if $verbose |
|
57
|
0 |
1 |
if $nb_chr_found < $nb_chr |
|
92
|
27 |
0 |
if (defined $self->{'bit_vectors'}{$chr}) { } |
|
105
|
3 |
0 |
defined $bv ? : |
|
112
|
6 |
0 |
if defined $bv |
|
127
|
5 |
0 |
if defined $bv |
|
135
|
2 |
0 |
if (defined $bv) |
|
137
|
5 |
8 |
if $bv->get($i) == 1 |