| line |
true |
false |
branch |
|
25
|
0 |
3 |
defined $args{'verbose'} ? : |
|
29
|
1 |
2 |
if (defined $args{'genome'}) { } |
|
|
1 |
1 |
elsif (defined $args{'crac_index_conf'}) { } |
|
|
1 |
0 |
elsif (defined $args{'sam_reader'}) { } |
|
32
|
2 |
0 |
if (not defined $bit_vectors{$chr}) { } |
|
39
|
0 |
1 |
if $verbose |
|
48
|
24 |
0 |
if (defined $chr_length) { } |
|
49
|
0 |
24 |
if $verbose |
|
56
|
0 |
1 |
if $nb_chr_found < $nb_chr |
|
91
|
27 |
0 |
if (defined $self->{'bit_vectors'}{$chr}) { } |
|
104
|
3 |
0 |
defined $bv ? : |
|
111
|
6 |
0 |
if defined $bv |
|
126
|
5 |
0 |
if defined $bv |
|
134
|
2 |
0 |
if (defined $bv) |
|
136
|
5 |
8 |
if $bv->get($i) == 1 |