| blib/lib/BioX/Seq/Stream/FASTA.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 15 | 18 | 83.3 |
| line | true | false | branch |
|---|---|---|---|
| 21 | 0 | 10 | if $self->{'buffer'} =~ /[\r\n]/ |
| 29 | 9 | 1 | if ($self->{'buffer'} =~ /([\r\n]{1,2})$/) { } |
| 39 | 9 | 0 | if ($self->{'buffer'} =~ /^>(\S+)\s*(.+)?$/) { } |
| 70 | 108 | 584 | if ($line =~ /^>(\S+)\s*(.+)?$/) { } |
| 76 | 59 | 49 | unless ($self->{'fast'}) |
| 79 | 1 | 58 | if ($seq =~ /[^A-Za-z\-\.\*]/) |
| 98 | 4 | 2 | if (defined $self->{'next_id'}) |
| 103 | 3 | 1 | unless ($self->{'fast'}) |
| 106 | 0 | 3 | if ($seq =~ /[^A-Za-z\-\.\*]/) |