| blib/lib/Bio/Tools/Run/Phylo/Phast/PhastCons.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| condition | 4 | 22 | 18.1 |
| line | !l | l&&!r | l&&r | condition |
|---|---|---|---|---|
| 281 | 0 | 0 | 1 | $num > 0 and $num < 1 |
| 316 | 0 | 0 | 1 | $num > 0 and $num < 1 |
| 354 | 0 | 0 | 0 | $aln and $tree |
| line | l | !l | condition |
|---|---|---|---|
| 284 | 3 | 0 | $self->{'coverage'} || (return) |
| 319 | 2 | 0 | $self->{'rho'} || (return) |
| 371 | 0 | 0 | $self->executable || (return) |
| 419 | 0 | 0 | $seq->location_from_column($feat->start + 1) || (next) |
| 420 | 0 | 0 | $seq->location_from_column($feat->end + 1) || (next) |
| line | l | !l&&r | !l&&!r | condition |
|---|---|---|---|---|
| 376 | 0 | 0 | 0 | $pf->run($self->_alignment, $self->_tree) || $self->throw('phyloFit failed to work as expected, is it installed?') |