Branch Coverage

blib/lib/Bio/Tools/Run/StandAloneBlastPlus/BlastMethods.pm
Criterion Covered Total %
branch 0 46 0.0


line true false branch
213 0 0 unless ($method)
216 0 0 unless ($query)
219 0 0 unless ($outfile)
228 0 0 if ($outformat)
229 0 0 unless ($outformat =~ /^"?[0-9]{1,2}/)
235 0 0 if ($method_args)
236 0 0 if @$method_args % 2
240 0 0 unless $self->check_db or $self->is_remote or $usr_args{'-subject'} or $usr_args{'-SUBJECT'}
242 0 0 if (%usr_args)
246 0 0 unless (grep /^$key$/, @avail_parms)
255 0 0 if ($self->is_remote)
262 0 0 if (%usr_args)
266 0 0 if ($blast_args{'-db'} and $blast_args{'-subject'})
273 0 0 unless $status
275 0 0 if ($blast_args{'-subject'})
276 0 0 unless (_demodernize($outfile))
283 0 0 if (/^(t|psi|rps|rpst)?blast[npx]?/)
328 0 0 unless ($method)
331 0 0 unless ($query)
334 0 0 unless ($subject)
340 0 0 if ($method_args)
364 0 0 unless $self->{'_results'}
380 0 0 unless $self->blast_out