| blib/lib/Bio/Tools/Run/Tmhmm.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 3 | 28 | 10.7 |
| line | true | false | branch |
|---|---|---|---|
| 81 | 0 | 1 | $^O =~ /mswin/i ? : |
| 130 | 0 | 2 | if ($self->program_dir) |
| 136 | 0 | 2 | $^O =~ /mswin/i ? : |
| 146 | 0 | 0 | unless $Bio::Tools::Run::Tmhmm::OK_FIELD{$attr} |
| 147 | 0 | 0 | if @_ |
| 169 | 0 | 0 | if $attr =~ /^-/ |
| 206 | 0 | 0 | unless ($ENV{'TMHMMDIR'}) |
| 228 | 0 | 0 | if (ref $seq) { } |
| 229 | 0 | 0 | if (ref($seq) =~ /GLOB/) |
| 267 | 0 | 0 | if (defined $infile1) |
| 290 | 0 | 0 | if ($self->NOPLOT) |
| 296 | 0 | 0 | unless $status == 0 |
| 299 | 0 | 0 | if (not ref($outfile) =~ /GLOB/) { } |
| 300 | 0 | 0 | unless open TMHMM, '<' . $outfile |