| Bio/Tools/GFF.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 24 | 35 | 68.5 |
| pod | 12 | 13 | 92.3 |
| line | count | pod | subroutine |
|---|---|---|---|
| 147 | 147 | n/a | BEGIN |
| 148 | 147 | n/a | BEGIN |
| 150 | 147 | n/a | BEGIN |
| 151 | 147 | n/a | BEGIN |
| 152 | 147 | n/a | BEGIN |
| 154 | 147 | n/a | BEGIN |
| 187 | 8 | n/a | _incrementGFF3ID |
| 194 | 16 | Yes | new |
| 227 | 16 | n/a | _parse_header |
| 290 | 0 | n/a | _parse_sequence |
| 348 | 1 | Yes | next_segment |
| 368 | 4 | Yes | next_feature |
| 406 | 0 | n/a | _feature_idx_by_seq_id |
| 432 | 3 | Yes | from_gff_string |
| 457 | 1 | n/a | _from_gff1_string |
| 506 | 1 | n/a | _from_gff2_string |
| 606 | 1 | n/a | _from_gff3_string |
| 645 | 48 | No | unescape |
| 663 | 3 | Yes | write_feature |
| 691 | 11 | Yes | gff_string |
| 717 | 1 | n/a | _gff1_string |
| 779 | 2 | n/a | _gff2_string |
| 881 | 0 | n/a | _gff25_string |
| 982 | 8 | n/a | _gff3_string |
| 1149 | 47 | Yes | gff_version |
| 1173 | 0 | Yes | newFh |
| 1194 | 0 | Yes | fh |
| 1209 | 0 | n/a | _seq_by_id_h |
| 1230 | 0 | Yes | get_seqs |
| 1257 | 3 | Yes | features_attached_to_seqs |
| 1280 | 0 | Yes | ignore_sequence |
| 1288 | 15 | n/a | DESTROY |
| 1293 | 0 | n/a | TIEHANDLE |
| 1298 | 0 | n/a | READLINE |
| 1306 | 0 | n/a |