| line |
!l |
l&&!r |
l&&r |
condition |
|
291
|
0 |
0 |
30244 |
ref $value and $value->isa('Bio::LocationI') |
|
326
|
66216 |
108 |
8 |
$self->{'_gsf_seq'}->is_circular and $self->location->isa('Bio::Location::SplitLocationI') |
|
341
|
0 |
0 |
8 |
$a_end == $primary_seq_length and $b_start == 1 |
|
|
0 |
0 |
8 |
$a_end == $primary_seq_length and $b_start == 1 and $a_strand == $b_strand |
|
379
|
65957 |
108 |
8 |
$self->{'_gsf_seq'}->is_circular and $self->location->isa('Bio::Location::SplitLocationI') |
|
394
|
0 |
0 |
8 |
$a_end == $primary_seq_length and $b_start == 1 |
|
|
0 |
0 |
8 |
$a_end == $primary_seq_length and $b_start == 1 and $a_strand == $b_strand |
|
429
|
2676 |
0 |
3 |
$length < 0 and defined $self->{'_gsf_seq'} |
|
470
|
638 |
38 |
4275 |
defined $value and $value |
|
|
676 |
0 |
4275 |
defined $value and $value and not $value =~ /^[A-Za-z]+$/ |
|
|
38 |
4275 |
0 |
defined $value and $value and not $value =~ /^[A-Za-z]+$/ and not $value =~ /^[+-]?\d+\.?\d*(e-\d+)?/ |
|
|
4275 |
0 |
0 |
defined $value and $value and not $value =~ /^[A-Za-z]+$/ and not $value =~ /^[+-]?\d+\.?\d*(e-\d+)?/ and $value != 0 |
|
503
|
0 |
1975 |
0 |
defined $value and not $value =~ /^[0-2.]$/ |
|
507
|
0 |
1967 |
8 |
defined $value and $value eq '.' |
|
667
|
0 |
0 |
17238 |
$seq and ref $seq |
|
|
0 |
0 |
17238 |
$seq and ref $seq and $seq->isa('Bio::PrimarySeqI') |
|
712
|
133 |
108 |
1 |
$self->{'_gsf_seq'}->is_circular and $self->location->isa('Bio::Location::SplitLocationI') |
|
|
241 |
0 |
1 |
$self->{'_gsf_seq'}->is_circular and $self->location->isa('Bio::Location::SplitLocationI') and $start > $end |
|
732
|
22 |
77 |
143 |
defined $self->strand and $self->strand == -1 |
|
881
|
4335 |
0 |
18952 |
$expand and $expand eq 'EXPAND' |
|
949
|
0 |
1 |
0 |
ref $self && exists $self->{'_gffio'} |