| Bio/SeqEvolution/Factory.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 20 | 23 | 86.9 |
| pod | 13 | 15 | 86.6 |
| line | count | pod | subroutine |
|---|---|---|---|
| 80 | 1 | n/a | BEGIN |
| 81 | 1 | n/a | BEGIN |
| 82 | 1 | n/a | BEGIN |
| 83 | 1 | n/a | BEGIN |
| 98 | 13 | Yes | new |
| 125 | 7 | n/a | _initialize |
| 152 | 6 | n/a | _load_format_module |
| 184 | 0 | Yes | type |
| 210 | 50 | Yes | identity |
| 232 | 61 | Yes | pam |
| 248 | 38 | Yes | mutation_count |
| 268 | 0 | Yes | seq |
| 291 | 7 | Yes | seq_type |
| 311 | 29 | Yes | get_mutation_counter |
| 326 | 5 | Yes | reset_mutation_counter |
| 342 | 7 | Yes | get_sequence_counter |
| 361 | 5 | Yes | reset_sequence_counter |
| 381 | 0 | Yes | each_seq |
| 409 | 2 | Yes | each_mutation |
| 433 | 13 | No | get_alignment_identity |
| 439 | 1 | No | get_alignmet |
| 460 | 35 | n/a | _increase_mutation_counter |
| 476 | 5 | n/a | _increase_sequence_counter |