| Bio/Seq/SequenceTrace.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| subroutine | 37 | 43 | 86.0 |
| pod | 28 | 30 | 93.3 |
| line | count | pod | subroutine |
|---|---|---|---|
| 70 | 1 | n/a | BEGIN |
| 71 | 1 | n/a | BEGIN |
| 72 | 1 | n/a | BEGIN |
| 73 | 1 | n/a | BEGIN |
| 74 | 1 | n/a | BEGIN |
| 76 | 1 | n/a | BEGIN |
| 101 | 20 | Yes | new |
| 153 | 0 | No | swq_obj |
| 177 | 518822 | Yes | trace |
| 214 | 1539 | Yes | peak_indices |
| 248 | 2 | n/a | _reset_peak_indices |
| 277 | 1291 | Yes | peak_index_at |
| 300 | 1 | Yes | alphabet |
| 330 | 11 | Yes | display_id |
| 360 | 1 | Yes | accession_number |
| 388 | 2 | Yes | primary_id |
| 411 | 2 | Yes | desc |
| 432 | 36 | Yes | id |
| 462 | 49 | Yes | seq |
| 491 | 9 | Yes | qual |
| 513 | 123 | Yes | length |
| 534 | 267 | Yes | qual_obj |
| 554 | 427 | Yes | seq_obj |
| 578 | 0 | n/a | _set_descriptors |
| 596 | 3 | Yes | subseq |
| 614 | 1107 | Yes | baseat |
| 632 | 3 | Yes | subqual |
| 650 | 1 | Yes | qualat |
| 667 | 6 | Yes | sub_peak_index |
| 701 | 57504 | Yes | sub_trace |
| 733 | 57516 | Yes | trace_length |
| 770 | 2 | Yes | sub_trace_object |
| 808 | 4 | n/a | _synthesize_traces |
| 889 | 0 | n/a | _dump_traces |
| 913 | 4 | No | initialize_traces |
| 935 | 57495 | Yes | trace_value_at |
| 944 | 0 | n/a | _deprecated_get_scf_version_2_base_structure |
| 972 | 0 | n/a | _deprecated_get_scf_version_3_base_structure |
| 992 | 133 | Yes | accuracies |
| 1019 | 8 | Yes | set_accuracies |
| 1048 | 0 | Yes | scf_dump |
| 1074 | 184 | n/a | _get_other_bases |
| 1096 | 5161 | Yes | accuracy_at |