Bio/SearchIO/psl.pm | |||
---|---|---|---|
Criterion | Covered | Total | % |
condition | 17 | 29 | 58.6 |
line | !l | l&&!r | l&&r | condition |
---|---|---|---|---|
193 | 2 | 2 | 10 | defined($_ = $self->_readline) and not /^\d+\s+\d+\s+/ |
217 | 2 | 3 | 1 | defined $lastquery and $lastquery ne $q_name |
511 | 0 | 82 | 9 | defined $nm and defined $Bio::SearchIO::psl::MODEMAP{$nm} |
82 | 7 | 2 | defined $nm and defined $Bio::SearchIO::psl::MODEMAP{$nm} and $Bio::SearchIO::psl::MODEMAP{$nm} eq 'result' | |
553 | 12 | 70 | 0 | $self->in_element('hsp') and $data->{'Name'} =~ /Hsp\_(qseq|hseq|midline)/ |
line | l | !l | condition |
---|---|---|---|
697 | 5 | 0 | $self->{'program_name'} || $Bio::SearchIO::psl::DefaultProgramName |
line | l | !l&&r | !l&&!r | condition |
---|---|---|---|---|
154 | 0 | 3 | 0 | $pname || $Bio::SearchIO::psl::DefaultProgramName |
425 | 1 | 0 | 2 | defined $lasthit or defined $lastquery |
600 | 0 | 0 | 0 | defined $name || defined $self->{'_elements'} |
0 | 0 | 0 | not defined $name || defined $self->{'_elements'} or scalar @{$self->{'_elements'};} == 0 |