| line |
true |
false |
branch |
|
124
|
0 |
41 |
if $self->{'_end_document'} |
|
125
|
1 |
40 |
if (/^cross_match version\s+(.*?)$/) { } |
|
|
1 |
39 |
elsif (/^Maximal single base matches/) { } |
|
|
0 |
39 |
elsif (/^(\d+) matching entries/) { } |
|
|
1 |
38 |
elsif ($start || $self->{'_result_count'} and /^\s*(\d+)/msx) { } |
|
|
1 |
37 |
elsif (not $self->{'_parameters'}) { } |
|
|
0 |
37 |
elsif (/^Query file(s):\s+(.*?)$/) { } |
|
|
0 |
37 |
elsif (/^Subject file(s):\s+(.*?)$/) { } |
|
140
|
1 |
0 |
if (/.*?\s+(\-.*?)$/) |
|
144
|
1 |
0 |
if ($pp[$i] =~ /^\-/) |
|
145
|
0 |
1 |
if ($pp[$i + 1] and not $pp[$i + 1] =~ /^\-/) { } |
|
198
|
0 |
0 |
unless ($blank =~ /^\s*$/) |
|
205
|
0 |
0 |
if $count >= 3 |
|
206
|
0 |
0 |
if /^$/ |
|
207
|
0 |
0 |
if (/^(C \S+.*?\d+ )(\S+) \d+$|^( \S+.*?\d+ )(\S+) \d+$$|^\s+$/) { } |
|
209
|
0 |
0 |
if ($1 or $3) { } |
|
210
|
0 |
0 |
$1 ? : |
|
211
|
0 |
0 |
$2 ? : |
|
214
|
0 |
0 |
if (/\s{$pad[0],$pad[0]}(.*?)$/) { } |
|
248
|
0 |
1 |
if ($r[0] eq 'ALIGNMENT') |
|
261
|
0 |
1 |
if ($r[8] eq 'C' and not $r[9] =~ /^\(\d+\)$/) { } |
|
272
|
0 |
1 |
$query_seq ? : |
|
|
0 |
1 |
$hit_seq ? : |
|
|
0 |
1 |
$homology_seq ? : |