| line |
!l |
l&&!r |
l&&r |
condition |
|
395
|
2 |
20 |
189 |
$_->{'frame'} == $frame and $_->{'strand'} == $strand |
|
398
|
76 |
95 |
18 |
$start >= $_->{'start'} and $stop <= $_->{'stop'} |
|
404
|
95 |
64 |
12 |
$start < $_->{'start'} and $stop >= $_->{'start'} + $max_overlap - 1 |
|
429
|
73 |
81 |
17 |
$stop > $_->{'stop'} and $start <= $_->{'stop'} - $max_overlap + 1 |
|
456
|
62 |
24 |
20 |
$overlap and @$contigs_ref > 1 |
|
467
|
31 |
19 |
2 |
$u_start < $i_start and $u_stop >= $i_start + $max_overlap - 1 |
|
|
20 |
27 |
3 |
$u_stop > $i_stop and $u_start <= $i_stop - $max_overlap + 1 |
|
|
19 |
27 |
1 |
$u_start >= $i_start and $u_stop <= $i_stop |
|
620
|
0 |
0 |
0 |
$num == 0 and not $rev |