Subroutine Coverage
| Bio/Matrix/PSM/SiteMatrixI.pm |
|
| Criterion |
Covered |
Total |
% |
| subroutine |
1 |
24 |
4.1
|
| pod |
18 |
18 |
100.0
|
| line |
count |
pod |
subroutine |
|
115
|
6 |
n/a |
BEGIN |
|
131
|
0 |
Yes |
calc_weight |
|
156
|
0 |
Yes |
next_pos |
|
174
|
0 |
Yes |
curpos |
|
191
|
0 |
Yes |
e_val |
|
208
|
0 |
Yes |
consensus |
|
226
|
0 |
Yes |
accession_number |
|
244
|
0 |
Yes |
width |
|
261
|
0 |
Yes |
IUPAC |
|
278
|
0 |
Yes |
IC |
|
296
|
0 |
Yes |
get_string |
|
313
|
0 |
Yes |
id |
|
331
|
0 |
Yes |
regexp |
|
352
|
0 |
Yes |
regexp_array |
|
369
|
0 |
Yes |
get_array |
|
388
|
0 |
n/a |
_to_IUPAC |
|
406
|
0 |
n/a |
_to_cons |
|
424
|
0 |
n/a |
_calculate_consensus |
|
443
|
0 |
n/a |
_compress_array |
|
462
|
0 |
n/a |
_uncompress_string |
|
481
|
0 |
Yes |
get_compressed_freq |
|
499
|
0 |
Yes |
get_compressed_logs |
|
518
|
0 |
Yes |
sequence_match_weight |
|
536
|
0 |
Yes |
get_all_vectors |