Bio/DB/IndexedBase.pm | |||
---|---|---|---|
Criterion | Covered | Total | % |
condition | 36 | 57 | 63.1 |
line | !l | l&&!r | l&&r | condition |
---|---|---|---|---|
399 | 9 | 0 | 0 | $^O =~ /^MSWin/i and eval 'use Win32; 1' |
746 | 25 | 0 | 20 | not defined $start || defined $stop || defined $strand and $id =~ /$compound_id/x |
line | l | !l | condition |
---|---|---|---|
383 | 0 | 20 | $opts{'-debug'} || 0 |
20 | 0 | $opts{'-glob'} || eval '$' . $class . '::file_glob' || '*' | |
0 | 20 | $opts{'-maxopen'} || 32 | |
3 | 17 | $opts{'-clean'} || 0 | |
0 | 20 | $opts{'-dbmargs'} || undef | |
389 | 1 | 19 | ref $path || '' |
671 | 0 | 20 | (stat $index)[9] || 0 |
680 | 63 | 0 | (stat $file)[9] || 0 |
755 | 7 | 2 | $self->length($id) || 0 |
757 | 13 | 32 | $strand ||= 1 |
861 | 9 | 0 | 'IO::File'->new($path) || (return) |
1184 | 1 | 0 | $self->next_seq || undef |
line | l | !l&&r | !l&&!r | condition |
---|---|---|---|---|
395 | 1 | 18 | 0 | $self->{'index_name'} ||= $self->_default_index_name($path) |
485 | 9 | 0 | 0 | $self->{'index_name'} ||= $self->_default_index_name($dir) |
526 | 10 | 0 | 0 | $self->{'index_name'} ||= $self->_default_index_name($file) |
553 | 0 | 1 | 0 | $self->{'index_name'} ||= "fileset_$digest.index" |
693 | 12 | 8 | 0 | $force_reindex || scalar @updated > 0 |
746 | 0 | 0 | 20 | defined $start || defined $stop || defined $strand |
755 | 36 | 7 | 2 | $stop ||= $self->length($id) || 0 |
756 | 36 | 7 | 2 | $start ||= $stop > 0 ? 1 : 0 |
1137 | 4 | 2 | 21 | $self->{'clean'} or $self->{'indexing'} |