line |
!l |
l&&!r |
l&&r |
condition |
132
|
155 |
240 |
110 |
defined $fstrand and $fstrand eq '-' |
203
|
68 |
208 |
48 |
defined $fstrand and $fstrand eq '-' |
764
|
0 |
0 |
0 |
defined $previous and $previous->stop + 1 >= $s->start |
|
0 |
0 |
0 |
defined $previous and $previous->stop + 1 >= $s->start and $pscore == $score |
|
0 |
0 |
0 |
defined $previous and $previous->stop + 1 >= $s->start and $pscore == $score and $previous->method eq $s->method |
|
0 |
0 |
0 |
defined $previous and $previous->start == $s->start |
|
0 |
0 |
0 |
defined $previous and $previous->start == $s->start and $previous->stop == $s->stop |
|
0 |
0 |
0 |
defined $previous and $previous->start == $s->start and $previous->stop == $s->stop and $previous->method eq $s->method |
769
|
0 |
0 |
0 |
$self->absolute and $self->strand < 0 |
776
|
0 |
0 |
0 |
ref $g and $g->isa('Bio::DB::GFF::Homol') |
956
|
0 |
0 |
0 |
$atts and $atts->{$tag} |
1015
|
202 |
0 |
0 |
$shrink and not $first++ |
1035
|
0 |
202 |
0 |
$h and $h->isa('Bio::DB::GFF::Homol') |
1036
|
0 |
0 |
0 |
$g and $g->isa('Bio::DB::GFF::Homol') |
1039
|
0 |
0 |
0 |
$shrink and not $tfirst++ |
1146
|
0 |
0 |
0 |
defined $start and defined $stop |
|
0 |
0 |
0 |
defined $start and defined $stop and $start > $stop |
1207
|
0 |
0 |
0 |
defined $start and defined $stop |
|
0 |
0 |
0 |
defined $start and defined $stop and $start > $stop |
1224
|
0 |
0 |
0 |
defined $parent and $parent ne '' |
line |
l |
!l&&r |
!l&&!r |
condition |
1022
|
0 |
0 |
166 |
not defined $self->{'start'} or $low < $self->{'start'} |
1024
|
0 |
7 |
159 |
not defined $self->{'stop'} or $high > $self->{'stop'} |
1027
|
0 |
4 |
32 |
not defined $self->{'start'} or $high > $self->{'start'} |
1029
|
0 |
0 |
36 |
not defined $self->{'stop'} or $low < $self->{'stop'} |
1044
|
0 |
0 |
0 |
not defined $g->{'start'} or $start < $g->{'start'} |
1045
|
0 |
0 |
0 |
not defined $g->{'stop'} or $stop > $g->{'stop'} |
1047
|
0 |
0 |
0 |
not defined $g->{'start'} or $start > $g->{'start'} |
1048
|
0 |
0 |
0 |
not defined $g->{'stop'} or $stop < $g->{'stop'} |
1121
|
20 |
0 |
0 |
$self->group || $self->SUPER::name |
1221
|
0 |
0 |
0 |
not defined $parent or $name ne $parent |