| line |
l |
!l&&r |
!l&&!r |
condition |
|
160
|
1 |
0 |
0 |
$is_codon_hash || $is_Aa_hash |
|
267
|
0 |
0 |
2 |
not $threshold or $threshold < 0 |
|
|
0 |
0 |
2 |
not $threshold or $threshold < 0 or $threshold > 100 |
|
457
|
0 |
0 |
0 |
$val < 0 or $val > 16 |
|
|
0 |
0 |
0 |
$val < 0 or $val > 16 or $val =~ /[^\d]/ |
|
|
0 |
0 |
0 |
$val < 0 or $val > 16 or $val =~ /[^\d]/ or $val == 7 |
|
|
0 |
0 |
0 |
$val < 0 or $val > 16 or $val =~ /[^\d]/ or $val == 7 or $val == 8 |
|
517
|
0 |
2 |
0 |
exists $Bio::CodonUsage::Table::STRICTAA{$aa} or exists $Bio::SeqUtils::ONECODE{$aa} |
|
522
|
0 |
2 |
0 |
$Bio::SeqUtils::THREECODE{$aa} || $aa |
|
548
|
0 |
0 |
0 |
$aa3 ||= $aa |
|
574
|
0 |
0 |
0 |
$aa3 ||= $aa |
|
590
|
0 |
0 |
0 |
exists $Bio::CodonUsage::Table::STRICTAA{$aa} || exists $Bio::SeqUtils::ONECODE{$aa} |
|
601
|
0 |
0 |
131 |
$cod =~ /[^ATCG]/ or not $cod =~ /\w\w\w/ |