| Bio/AlignIO/psi.pm | |||
|---|---|---|---|
| Criterion | Covered | Total | % |
| branch | 11 | 14 | 78.5 |
| line | true | false | branch |
|---|---|---|---|
| 113 | 30 | 1792 | if /^\s+$/ |
| 114 | 2 | 1790 | unless (defined $aln) |
| 118 | 112 | 1680 | unless defined $seqs{$id} |
| 131 | 2 | 0 | if defined $aln and $aln->num_sequences |
| 149 | 0 | 1 | unless (defined $aln and ref $aln and $aln->isa('Bio::Align::AlignI')) |
| 163 | 1 | 4 | if $end > $alnlen |
| 173 | 1 | 0 | if $self->_flush_on_write and defined $self->_fh |