Bio/Align/ProteinStatistics.pm | |||
---|---|---|---|
Criterion | Covered | Total | % |
condition | 19 | 47 | 40.4 |
line | !l | l&&!r | l&&r | condition |
---|---|---|---|---|
139 | 0 | 0 | 2 | defined $aln and ref $aln |
0 | 0 | 2 | defined $aln and ref $aln and $aln->isa('Bio::Align::AlignI') | |
144 | 0 | 0 | 2 | defined $m and $method =~ /$m/i |
214 | 6724 | 3972 | 31488 | $m1 ne '-' and $m2 ne '-' |
264 | 0 | 12816 | 18672 | $t1 ne 'X' and $t1 eq $t2 |
12816 | 0 | 0 | $t1 eq 'B' and $t2 =~ /[DN]/ | |
12816 | 0 | 0 | $t2 eq 'B' and $t1 =~ /[DN]/ | |
12816 | 0 | 0 | $t1 eq 'Z' and $t2 =~ /[EQ]/ | |
12816 | 0 | 0 | $t2 eq 'Z' and $t1 =~ /[EQ]/ | |
12816 | 0 | 0 | $t1 eq 'X' and $t2 eq 'X' | |
306 | 0 | 0 | 2 | defined $aln && $aln->isa('Bio::Align::AlignI') |
line | l | !l | condition |
---|---|---|---|
142 | 2 | 0 | $method ||= 'Kimura' |
line | l | !l&&r | !l&&!r | condition |
---|---|---|---|---|
264 | 0 | 0 | 12816 | $t1 eq 'B' and $t2 =~ /[DN]/ or $t2 eq 'B' and $t1 =~ /[DN]/ |
0 | 0 | 12816 | $t1 eq 'Z' and $t2 =~ /[EQ]/ or $t2 eq 'Z' and $t1 =~ /[EQ]/ | |
0 | 0 | 12816 | $t1 eq 'B' and $t2 =~ /[DN]/ or $t2 eq 'B' and $t1 =~ /[DN]/ or ($t1 eq 'Z' and $t2 =~ /[EQ]/ or $t2 eq 'Z' and $t1 =~ /[EQ]/) | |
0 | 0 | 12816 | $t1 eq 'X' or $t2 eq 'X' |