Condition Coverage

Bio/Align/PairwiseStatistics.pm
Criterion Covered Total %
condition 20 38 52.6


and 3 conditions

line !l l&&!r l&&r condition
101 0 0 8 defined $aln && $aln->isa('Bio::Align::AlignI')
126 0 0 2 defined $aln && $aln->isa('Bio::Align::AlignI')
165 0 0 10 defined $aln && $aln->isa('Bio::Align::AlignI')
207 0 0 4 defined $aln && $aln->isa('Bio::Align::AlignI')
216 0 4 0 $seq1->alphabet eq 'dna' || $seq1->alphabet eq 'rna' and $seq2->alphabet eq 'dna' || $seq2->alphabet eq 'rna'
238 26 54 0 $res1 eq '-' && $res2 eq '-'
243 0 0 0 $prevres1 eq '-' and $prevres2 eq '-'

or 2 conditions

line l !l condition
220 2 2 $match ||= 2
221 2 2 $mismatch ||= -3
222 2 2 $gap_open ||= -5
223 2 2 $gap_ext ||= -2

or 3 conditions

line l !l&&r !l&&!r condition
216 4 0 0 $seq1->alphabet eq 'dna' || $seq1->alphabet eq 'rna'
4 0 0 $seq2->alphabet eq 'dna' || $seq2->alphabet eq 'rna'
230 54 26 686 $res1 eq '-' || $res2 eq '-'