| line |
true |
false |
branch |
|
117
|
1 |
0 |
if $aa_ori |
|
118
|
1 |
0 |
if $aa_mut |
|
119
|
0 |
1 |
if $codon_ori |
|
120
|
0 |
1 |
if $codon_table |
|
147
|
1 |
5 |
if (defined $value) |
|
148
|
0 |
1 |
if (not uc($value) =~ /^[ARNDCQEGHILKMFPSTWYVBZX*]$/) { } |
|
176
|
1 |
6 |
if (defined $value) |
|
177
|
0 |
1 |
if (not uc($value) =~ /^[ARNDCQEGHILKMFPSTWYVBZX*]$/) { } |
|
205
|
1 |
6 |
if (defined $value) |
|
206
|
0 |
1 |
if (length $value != 3 or lc $value =~ /[^atgc]/) |
|
232
|
2 |
4 |
if (defined $value) |
|
233
|
0 |
2 |
if (not $value =~ /^\d+$/) { } |
|
240
|
2 |
4 |
if (not exists $self->{'codon_table'}) { } |
|
265
|
0 |
2 |
unless defined $self->aa_ori |
|
266
|
0 |
2 |
unless defined $self->aa_mut |
|
271
|
1 |
3 |
if $self->codon_ori and $self->codon_ori ne $codon_ori |
|
279
|
36 |
18 |
if ($nt_ori ne $nt_mut) |
|
287
|
3 |
15 |
if ($length == 1) |