Bio/Tools/Alignment/Trim.pm | |||
---|---|---|---|
Criterion | Covered | Total | % |
condition | 2 | 30 | 6.6 |
line | !l | l&&!r | l&&r | condition |
---|---|---|---|---|
376 | 0 | 0 | 0 | $class eq 'singlet' and $name =~ /$fdesig$/ |
0 | 0 | 0 | $class eq 'singlet' and $name =~ /$rdesig$/ | |
0 | 0 | 0 | $class eq 'singleton' and $name =~ /$fdesig$/ | |
0 | 0 | 0 | $class eq 'singleton' and $name =~ /$rdesig$/ | |
454 | 0 | 0 | 0 | $qualsum and $qualsum >= $windowsize * $phreds |
540 | 0 | 0 | 0 | $qualities[$current] and $qualities[$current] != 0 |
589 | 0 | 0 | 0 | $qualsum && $windowsize |
line | l | !l&&r | !l&&!r | condition |
---|---|---|---|---|
124 | 0 | 0 | 1 | $windowsize || $Bio::Tools::Alignment::Trim::DEFAULTS{'windowsize'} |
125 | 0 | 0 | 1 | $phreds || $Bio::Tools::Alignment::Trim::DEFAULTS{'phreds'} |
372 | 0 | 0 | 0 | $points[0] or $points[1] |