| line |
true |
false |
branch |
|
111
|
0 |
3 |
if $width |
|
112
|
3 |
0 |
unless (defined $self->sequence_factory) |
|
132
|
0 |
2 |
unless my $entry = $self->_readline |
|
135
|
0 |
2 |
if ($entry =~ /\A\s*\Z/s) |
|
136
|
0 |
0 |
unless $entry = $self->_readline |
|
142
|
2 |
0 |
if defined $sequence |
|
148
|
2 |
0 |
if ($top =~ /^\s*(\S+)\s*(.*)/) |
|
152
|
0 |
2 |
if (defined $id and $id eq '') |
|
154
|
2 |
0 |
if defined $sequence |
|
158
|
0 |
2 |
if (defined $sequence and length $sequence == 0) { } |
|
159
|
0 |
0 |
unless (defined $alphabet) |
|
190
|
2 |
0 |
unless (defined $alphabet) |
|
210
|
0 |
1 |
unless defined $seq and ref $seq and $seq->isa('Bio::PrimarySeqI') |
|
215
|
0 |
1 |
if ($seq->can('desc') and my $desc = $seq->desc) |
|
219
|
1 |
0 |
if (length $str > 0) { } |
|
224
|
0 |
1 |
unless $self->_print('>', $top, "\n", $str) |
|
225
|
1 |
0 |
if ($seq->isa('Bio::Seq::MetaI')) |
|
234
|
1 |
0 |
if $self->_flush_on_write and defined $self->_fh |
|
251
|
0 |
1 |
if (defined $value) |