| line |
!l |
l&&!r |
l&&r |
condition |
|
80
|
747 |
773 |
388 |
$mode eq '-seq' and $line =~ /^@([^\n]+)$/mosx |
|
|
747 |
389 |
384 |
$mode eq '-seq' and $line =~ /^\+([^\n]*)/mosx |
|
94
|
28 |
354 |
2 |
$desc and $$data{-'descriptor'} ne $desc |
|
100
|
389 |
381 |
366 |
$mode eq '-raw_quality' and defined $$data{-'raw_quality'} |
|
|
770 |
14 |
352 |
$mode eq '-raw_quality' and defined $$data{-'raw_quality'} and length $$data{-'raw_quality'} >= length $$data{-'seq'} |
|
120
|
2 |
384 |
0 |
$$data{-'seq'} and defined $$data{-'raw_quality'} |
|
132
|
0 |
69667 |
9 |
$self->{'_validate_qual'} and not exists $self->{'chr2qual'}{$_} |
|
171
|
6 |
2 |
1 |
$ns eq 'solexa' && $var eq 'solexa' |
|
175
|
181 |
270 |
92 |
$var ne 'solexa' and $ns eq 'solexa' |
|
194
|
0 |
7 |
2 |
$self->{'_validate_qual'} and %bad_qual |